Clostridium sp. chh4-2

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. chh4-2 is characterized by having a single replicon, which indicates a streamlined genomic structure. This trait can be significant in understanding the organism's genetic stability and replication efficiency. The accession number for Clostridium sp. chh4-2 is PKUU00000000.1, which serves as a reference for genomic data and facilitates further research and comparison with other Clostridium species. The presence of only one replicon may suggest a specific evolutionary adaptation that allows Clostridium sp. chh4-2 to thrive in its ecological niche. This streamlined genome can be advantageous for survival in environments where resource allocation is critical, possibly leading to a more efficient metabolic pathway. Clostridium species are generally known for their anaerobic capabilities and involvement in various ecological processes, including fermentation and nutrient cycling. The unique genomic structure of Clostridium sp. chh4-2 may play a role in its ecological interactions and functional contributions within microbial communities. Understanding its genetic makeup and adaptations could provide insights into its ecological role, particularly in anaerobic environments where Clostridium species often dominate. In summary, Clostridium sp. chh4-2 is defined by its single replicon and is situated within a diverse group of microorganisms, potentially contributing to important ecological functions within its habitat.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. chh4-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. chh4-2 Scaffold61, whole genome shotgun sequence.

Gene Summary

Adenine Count

1672159 bp

Thymine Count

1638274 bp

Guanine Count

1431055 bp

Cytosine Count

1348249 bp

Genome Length

6089737 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

112 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna pseudouridine(516) synthaseC0033_00545Not AvailableNegative112713 - 11345327861.6
sam-dependent methyltransferaseC0033_00550Not AvailableNegative113453 - 11480550952.5
m23 family peptidaseC0033_00555Not AvailableNegative114884 - 11568730834.4
nucleoside recognition proteinC0033_00560Not AvailablePositive115739 - 11665333806.8
vacuolar family h+-atpase subunit hC0033_00565Not AvailableNegative116613 - 11719421581.3
pantetheine-phosphate adenylyltransferaseC0033_00570Not AvailableNegative117226 - 11770217824.6
16s rrna (guanine(966)-n(2))-methyltransferase rsmdC0033_00575Not AvailableNegative117704 - 11826421001.3
acid-soluble spore proteinC0033_00580Not AvailableNegative118722 - 1189287354.74
peptidoglycan editing factor pgefC0033_00585Not AvailableNegative119059 - 11991331939.9
yran family proteinC0033_00590Not AvailableNegative119925 - 12026613588.2

Displaying genes 171 – 180 of 5268 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.