Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Sedimenticolaceae
Genus
Sedimenticola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Sedimenticolaceae |
| Genus | Sedimenticola |
| Species | Sedimenticola sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892894 bp
Thymine Count
895434 bp
Guanine Count
1079435 bp
Cytosine Count
1066596 bp
Genome Length
3934398 bp
Protein-coding Genes
3652 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virulence protein scie type | C0631_10285 | Not Available | Negative | 2105991 - 2106806 | 30365.1 |
| type vi secretion system tube protein hcp | C0631_10290 | Not Available | Negative | 2106915 - 2107406 | 17790.8 |
| type vi secretion system contractile sheath large subunit | C0631_10295 | Not Available | Negative | 2107462 - 2108961 | 55975.8 |
| type vi secretion system contractile sheath small subunit | C0631_10300 | Not Available | Negative | 2108966 - 2109490 | 18986.6 |
| type vi secretion system protein tssa | C0631_10305 | Not Available | Negative | 2109692 - 2110723 | 37822.4 |
| type vi secretion system-associated fha domain protein tagh | C0631_10310 | Not Available | Positive | 2111204 - 2112820 | 60420.6 |
| type vi secretion system lipoprotein tssj | C0631_10315 | Not Available | Positive | 2112830 - 2113369 | 19770.8 |
| type vi secretion system baseplate subunit tssk | C0631_10320 | Not Available | Positive | 2113460 - 2114797 | 49965.5 |
| type vi secretion system protein tssl | C0631_10325 | Not Available | Positive | 2114810 - 2116120 | 48460.3 |
| type vi secretion system membrane subunit tssm | C0631_10330 | Not Available | Positive | 2116122 - 2119679 | 133639.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
