Kineobactrum sediminis strain F02

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Cellvibrionales

Family

Halieaceae

Genus

Kineobactrum

Description

Kineobactrum sediminis strain F02 is characterized by a single replicon, indicating a streamlined genomic structure. This strain is cataloged under the accession number PKLZ00000000.1, which serves as a unique identifier for its genomic sequence in biological databases. The presence of a single replicon may suggest that Kineobactrum sediminis strain F02 possesses a simplified genetic architecture, which can have implications for genetic stability and adaptability. This characteristic can be advantageous in various ecological niches, allowing the strain to potentially thrive in specific environments with reduced genomic complexity. In terms of biological significance, the unique traits of Kineobactrum sediminis strain F02 may contribute to its ecological role, possibly influencing nutrient cycling or microbial interactions within its habitat. Its evolutionary adaptations, reflected in its genomic structure, can provide insights into how this strain interacts with other microorganisms and responds to environmental pressures. Overall, the genomic features of Kineobactrum sediminis strain F02, particularly its single replicon, highlight its potential ecological versatility and adaptability, making it a subject of interest for further microbiological studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCellvibrionales
FamilyHalieaceae
GenusKineobactrum
SpeciesKineobactrum sediminis
Strainstrain F02

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Kineobactrum sediminis strain F02 contig39, whole genome shotgun

Gene Summary

Adenine Count

845795 bp

Thymine Count

842808 bp

Guanine Count

1183841 bp

Cytosine Count

1188536 bp

Genome Length

4060980 bp

Protein-coding Genes

3537 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidase c26CWI75_17235Not AvailableNegative3860012 - 386070725365.6
alpha-l-fucosidaseCWI75_17240Not AvailableNegative3860692 - 386169038304.4
class ii glutamine amidotransferaseCWI75_17245Not AvailableNegative3861753 - 386258030925.7
hypothetical proteinCWI75_17250Not AvailableNegative3862593 - 386418859092.2
hypothetical proteinCWI75_17255Not AvailableNegative3864269 - 386463113384.9
serine hydrolaseCWI75_17260Not AvailablePositive3864836 - 386613147801.0
srpbcc family proteinCWI75_17265Not AvailableNegative3866088 - 386663319905.6
nitroreductase family deazaflavin-dependent oxidoreductaseCWI75_17270Not AvailablePositive3866838 - 386729617125.3
hypothetical proteinCWI75_17275Not AvailablePositive3867543 - 386880542909.7
hypothetical proteinCWI75_17280Not AvailablePositive3868904 - 387004940071.0

Displaying genes 3401 – 3410 of 3591 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm00027107,8-dihydrofolateC19H19N7O6Chemical structure of 7,8-dihydrofolateNot available
Average441.405Da
Monoisotopic441.1407785Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003701L-methionine (S)-S-oxideC5H11NO3SChemical structure of L-methionine (S)-S-oxide62697-73-8
Average165.21Da
Monoisotopic165.045964392Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.