Kineobactrum sediminis strain F02

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Cellvibrionales

Family

Halieaceae

Genus

Kineobactrum

Description

Kineobactrum sediminis strain F02 is characterized by a single replicon, indicating a streamlined genomic structure. This strain is cataloged under the accession number PKLZ00000000.1, which serves as a unique identifier for its genomic sequence in biological databases. The presence of a single replicon may suggest that Kineobactrum sediminis strain F02 possesses a simplified genetic architecture, which can have implications for genetic stability and adaptability. This characteristic can be advantageous in various ecological niches, allowing the strain to potentially thrive in specific environments with reduced genomic complexity. In terms of biological significance, the unique traits of Kineobactrum sediminis strain F02 may contribute to its ecological role, possibly influencing nutrient cycling or microbial interactions within its habitat. Its evolutionary adaptations, reflected in its genomic structure, can provide insights into how this strain interacts with other microorganisms and responds to environmental pressures. Overall, the genomic features of Kineobactrum sediminis strain F02, particularly its single replicon, highlight its potential ecological versatility and adaptability, making it a subject of interest for further microbiological studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCellvibrionales
FamilyHalieaceae
GenusKineobactrum
SpeciesKineobactrum sediminis
Strainstrain F02

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Kineobactrum sediminis strain F02 contig39, whole genome shotgun

Gene Summary

Adenine Count

845795 bp

Thymine Count

842808 bp

Guanine Count

1183841 bp

Cytosine Count

1188536 bp

Genome Length

4060980 bp

Protein-coding Genes

3537 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
php domain-containing proteinCWI75_12790Not AvailablePositive2865654 - 286657733104.3
threonylcarbamoyl-amp synthaseCWI75_12795Not AvailablePositive2866574 - 286719723069.9
segregation/condensation protein aCWI75_12800Not AvailablePositive2867217 - 286808332537.3
smc-scp complex subunit scpbCWI75_12805Not AvailablePositive2868085 - 286873824360.9
23s rrna pseudouridylate synthase bCWI75_12810Not AvailablePositive2868837 - 286965531353.0
ycik family oxidoreductaseCWI75_12815Not AvailableNegative2869691 - 287045226357.3
phosphoglycolate phosphataseCWI75_12820Not AvailableNegative2870485 - 287114123588.1
bifunctional 3-demethylubiquinol 3-o-methyltransferase/2-polyprenyl-6-hydroxyphenol methylaseCWI75_12825Not AvailableNegative2871162 - 287188726281.7
n-ethylammeline chlorohydrolaseCWI75_12830Not AvailableNegative2871884 - 287322147212.5
dna gyrase subunit aCWI75_12835Not AvailablePositive2873508 - 287610596344.7

Displaying genes 2531 – 2540 of 3591 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm00027107,8-dihydrofolateC19H19N7O6Chemical structure of 7,8-dihydrofolateNot available
Average441.405Da
Monoisotopic441.1407785Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003701L-methionine (S)-S-oxideC5H11NO3SChemical structure of L-methionine (S)-S-oxide62697-73-8
Average165.21Da
Monoisotopic165.045964392Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.