Pseudomonas sp. QC2 QCBJ29

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. QC2 QCBJ29 is characterized by having a single replicon and is cataloged under the accession number PKKS00000000.1. This bacterium belongs to the Pseudomonas genus, which is known for its metabolic diversity and adaptability to various environments. Pseudomonas species are commonly found in soil, water, and as part of the microbiota in plants and animals, contributing to nutrient cycling and ecological balance. The single replicon trait indicates a streamlined genomic structure, which may affect its replication and maintenance strategies in diverse habitats. The accession number PKKS00000000.1 provides a reference for genomic data that can be used for further studies, including phylogenetic analysis and understanding the genetic basis of its ecological roles. Given the ecological significance of the Pseudomonas genus in bioremediation and plant growth promotion, Pseudomonas sp. QC2 QCBJ29 may also play a role in these processes. Overall, the traits of Pseudomonas sp. QC2 QCBJ29 highlight its potential importance in environmental microbiology, particularly in contexts where microbial diversity contributes to ecosystem functionality and resilience. Further research would be beneficial to elucidate its specific ecological roles and applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. QC2
StrainQCBJ29

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. QC2 QCBJ29
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. QC2 QCBJ29, whole genome shotgun sequence.

Gene Summary

Adenine Count

1280189 bp

Thymine Count

1289186 bp

Guanine Count

1991427 bp

Cytosine Count

1977353 bp

Genome Length

6538155 bp

Protein-coding Genes

5710 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
prephenate dehydrataseQCBJ_12125Not AvailableNegative2686426 - 268752040318.5
3-phosphoserine/phosphohydroxythreonine aminotransferaseQCBJ_12130Not AvailableNegative2687520 - 268860539826.5
dna gyrase subunit aQCBJ_12135Not AvailableNegative2688848 - 269150298018.0
s-methyl-5-thioribose-1-phosphate isomeraseQCBJ_12140Not AvailableNegative2691926 - 269300238568.5
n-ethylammeline chlorohydrolaseQCBJ_12145Not AvailablePositive2693111 - 269444247890.7
bifunctional 3-demethylubiquinone 3-o-methyltransferase/2-octaprenyl-6-hydroxy phenol methylaseQCBJ_12150Not AvailablePositive2694507 - 269520526058.5
n-acetylmuramic acid 6-phosphate phosphatase muppQCBJ_12155Not AvailablePositive2695210 - 269588124641.8
hypothetical proteinQCBJ_12160Not AvailablePositive2695888 - 26960676139.4
ycik family oxidoreductaseQCBJ_12165Not AvailablePositive2696060 - 269680026412.8
abc transporter substrate-binding proteinQCBJ_12170Not AvailableNegative2696869 - 269838356478.9

Displaying genes 2511 – 2520 of 5869 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.