Pseudomonas sp. QC2 QCBJ29

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. QC2 QCBJ29 is characterized by having a single replicon and is cataloged under the accession number PKKS00000000.1. This bacterium belongs to the Pseudomonas genus, which is known for its metabolic diversity and adaptability to various environments. Pseudomonas species are commonly found in soil, water, and as part of the microbiota in plants and animals, contributing to nutrient cycling and ecological balance. The single replicon trait indicates a streamlined genomic structure, which may affect its replication and maintenance strategies in diverse habitats. The accession number PKKS00000000.1 provides a reference for genomic data that can be used for further studies, including phylogenetic analysis and understanding the genetic basis of its ecological roles. Given the ecological significance of the Pseudomonas genus in bioremediation and plant growth promotion, Pseudomonas sp. QC2 QCBJ29 may also play a role in these processes. Overall, the traits of Pseudomonas sp. QC2 QCBJ29 highlight its potential importance in environmental microbiology, particularly in contexts where microbial diversity contributes to ecosystem functionality and resilience. Further research would be beneficial to elucidate its specific ecological roles and applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. QC2
StrainQCBJ29

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. QC2 QCBJ29
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. QC2 QCBJ29, whole genome shotgun sequence.

Gene Summary

Adenine Count

1280189 bp

Thymine Count

1289186 bp

Guanine Count

1991427 bp

Cytosine Count

1977353 bp

Genome Length

6538155 bp

Protein-coding Genes

5710 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidine--trna ligaseQCBJ_11620Not AvailableNegative2581856 - 258314547885.6
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)QCBJ_11625Not AvailableNegative2583167 - 258427639687.2
duf4115 domain-containing proteinQCBJ_11630Not AvailableNegative2584279 - 258526534183.3
type iv pilus biogenesis/stability protein pilwQCBJ_11635Not AvailableNegative2585265 - 258602328383.6
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnQCBJ_11640Not AvailableNegative2586036 - 258718442371.3
nucleoside-diphosphate kinaseQCBJ_11645Not AvailableNegative2587214 - 258763914937.8
fe-s assembly protein iscxQCBJ_11650Not AvailableNegative2587731 - 25879317435.83
isc system 2fe-2s type ferredoxinQCBJ_11655Not AvailableNegative2587946 - 258828712319.4
fe-s protein assembly chaperone hscaQCBJ_11660Not AvailableNegative2588291 - 259015365936.9
co-chaperone hscbQCBJ_11665Not AvailableNegative2590207 - 259072820274.9

Displaying genes 2411 – 2420 of 5869 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.