Pseudomonas sp. QC2 QCBJ29

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. QC2 QCBJ29 is characterized by having a single replicon and is cataloged under the accession number PKKS00000000.1. This bacterium belongs to the Pseudomonas genus, which is known for its metabolic diversity and adaptability to various environments. Pseudomonas species are commonly found in soil, water, and as part of the microbiota in plants and animals, contributing to nutrient cycling and ecological balance. The single replicon trait indicates a streamlined genomic structure, which may affect its replication and maintenance strategies in diverse habitats. The accession number PKKS00000000.1 provides a reference for genomic data that can be used for further studies, including phylogenetic analysis and understanding the genetic basis of its ecological roles. Given the ecological significance of the Pseudomonas genus in bioremediation and plant growth promotion, Pseudomonas sp. QC2 QCBJ29 may also play a role in these processes. Overall, the traits of Pseudomonas sp. QC2 QCBJ29 highlight its potential importance in environmental microbiology, particularly in contexts where microbial diversity contributes to ecosystem functionality and resilience. Further research would be beneficial to elucidate its specific ecological roles and applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. QC2
StrainQCBJ29

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. QC2 QCBJ29
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. QC2 QCBJ29, whole genome shotgun sequence.

Gene Summary

Adenine Count

1280189 bp

Thymine Count

1289186 bp

Guanine Count

1991427 bp

Cytosine Count

1977353 bp

Genome Length

6538155 bp

Protein-coding Genes

5710 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyl-coa dehydrogenaseQCBJ_08115Not AvailableNegative1792929 - 179407741351.4
crotonaseQCBJ_08120Not AvailableNegative1794081 - 179518440767.1
hpp family proteinQCBJ_08125Not AvailableNegative1795326 - 179603624598.3
glycosyltransferaseQCBJ_08130Not AvailableNegative1796617 - 179823959857.9
udp-glucose/gdp-mannose dehydrogenase family proteinQCBJ_08135Not AvailableNegative1798243 - 179963451414.6
4-amino-4-deoxy-l-arabinose-phospho-udp flippaseQCBJ_08140Not AvailableNegative1799631 - 180004414573.2
4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arneQCBJ_08145Not AvailableNegative1800041 - 180038812859.5
lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferaseQCBJ_08150Not AvailableNegative1800385 - 180204061820.5
4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylaseQCBJ_08155Not AvailableNegative1802037 - 180292132534.9
bifunctional udp-glucuronic acid oxidase/udp-4-amino-4-deoxy-l-arabinose formyltransferaseQCBJ_08160Not AvailableNegative1802921 - 180491274248.6

Displaying genes 1721 – 1730 of 5869 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.