Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Winkia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Winkia |
| Species | Winkia neuii |
| Strain | strain UMB0402 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
525095 bp
Thymine Count
527204 bp
Guanine Count
689427 bp
Cytosine Count
663028 bp
Genome Length
2404759 bp
Protein-coding Genes
2010 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yccf domain-containing protein | CYJ19_02670 | Not Available | Negative | 584861 - 585268 | 14580.6 |
| serine/threonine protein phosphatase | CYJ19_02675 | Not Available | Positive | 585490 - 587541 | 73465.7 |
| type i-e crispr-associated protein cas5/casd | CYJ19_02680 | Not Available | Negative | 589676 - 590362 | 25788.8 |
| type i-e crispr-associated protein cas7/cse4/casc | CYJ19_02685 | Not Available | Negative | 590355 - 591413 | 38629.0 |
| type i-e crispr-associated protein cse2/casb | CYJ19_02690 | Not Available | Negative | 591415 - 592011 | 22879.2 |
| type i-e crispr-associated protein cse1/casa | CYJ19_02695 | Not Available | Negative | 592008 - 593645 | 60983.5 |
| type i-e crispr-associated protein cas6/cse3/case | CYJ19_02700 | Not Available | Positive | 593792 - 594454 | 23755.6 |
| crispr-associated helicase/endonuclease cas3 | CYJ19_02705 | Not Available | Positive | 594457 - 597057 | 95626.7 |
| type i-e crispr-associated endonuclease cas1 | CYJ19_02710 | Not Available | Positive | 597057 - 598001 | 34030.2 |
| type i-e crispr-associated endoribonuclease cas2 | CYJ19_02715 | Not Available | Positive | 598001 - 598276 | 9791.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
