Neisseria perflava strain UMB0210

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Neisseria

Description

Neisseria perflava strain UMB0210 is a bacterium primarily isolated from urine samples, indicating its potential role in urinary environments. This strain possesses flagella, which may contribute to its motility in liquid environments, potentially enhancing its ability to colonize or persist in the urinary tract of its host, Homo sapiens. The genomic characteristics of N. perflava strain UMB0210 are noteworthy, as it contains a single replicon, suggesting a straightforward genetic organization. This simplicity may facilitate its adaptation to specific niches within the urinary system. The strain is cataloged under the accession number PKJP00000000.1, which allows for further genomic studies and comparisons within the Neisseria genus. From an ecological perspective, the presence of N. perflava in urine samples may reflect its role in the microbiome of the human urogenital tract. Its motility, indicated by flagella, could play a crucial role in its interactions with the host environment, potentially influencing urinary tract health or disease. Understanding the dynamics of such bacteria in urinary habitats is essential for comprehending their ecological roles and implications for human health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusNeisseria
SpeciesNeisseria perflava
Strainstrain UMB0210

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Neisseria perflava strain UMB0210
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitaturine samples
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Neisseria perflava strain UMB0210 ERR1203623.17957_1_35.22, whole

Gene Summary

Adenine Count

584604 bp

Thymine Count

597674 bp

Guanine Count

575362 bp

Cytosine Count

552552 bp

Genome Length

2311158 bp

Protein-coding Genes

2127 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion protein icmfCYJ99_05905Not AvailablePositive1244848 - 1248123122186.0
type vi secretion system protein tssaCYJ99_05910Not AvailablePositive1248123 - 124974861690.1
type vi secretion system baseplate subunit tssfCYJ99_05915Not AvailablePositive1249758 - 125152467717.2
type vi secretion system baseplate subunit tssgCYJ99_05920Not AvailablePositive1251488 - 125259742355.1
type vi secretion system lipoprotein tssjCYJ99_05925Not AvailablePositive1252617 - 125315620312.8
type vi secretion system baseplate subunit tsseCYJ99_05930Not AvailablePositive1253156 - 125356915621.9
hypothetical proteinCYJ99_05935Not AvailablePositive1253615 - 125512954570.9
abc transporterCYJ99_05950Not AvailableNegative1256648 - 125747529682.7
stas domain-containing proteinCYJ99_05955Not AvailableNegative1257472 - 125778911928.2
transporterCYJ99_05960Not AvailableNegative1257814 - 125840421333.7

Displaying genes 1161 – 1170 of 2184 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.