Neisseria perflava strain UMB0210

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Neisseria

Description

Neisseria perflava strain UMB0210 is a bacterium primarily isolated from urine samples, indicating its potential role in urinary environments. This strain possesses flagella, which may contribute to its motility in liquid environments, potentially enhancing its ability to colonize or persist in the urinary tract of its host, Homo sapiens. The genomic characteristics of N. perflava strain UMB0210 are noteworthy, as it contains a single replicon, suggesting a straightforward genetic organization. This simplicity may facilitate its adaptation to specific niches within the urinary system. The strain is cataloged under the accession number PKJP00000000.1, which allows for further genomic studies and comparisons within the Neisseria genus. From an ecological perspective, the presence of N. perflava in urine samples may reflect its role in the microbiome of the human urogenital tract. Its motility, indicated by flagella, could play a crucial role in its interactions with the host environment, potentially influencing urinary tract health or disease. Understanding the dynamics of such bacteria in urinary habitats is essential for comprehending their ecological roles and implications for human health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusNeisseria
SpeciesNeisseria perflava
Strainstrain UMB0210

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Neisseria perflava strain UMB0210
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitaturine samples
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Neisseria perflava strain UMB0210 ERR1203623.17957_1_35.22, whole

Gene Summary

Adenine Count

584604 bp

Thymine Count

597674 bp

Guanine Count

575362 bp

Cytosine Count

552552 bp

Genome Length

2311158 bp

Protein-coding Genes

2127 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atpaseCYJ99_05045Not AvailableNegative1061623 - 106345869025.3
hypothetical proteinCYJ99_05050Not AvailableNegative1063463 - 106457543184.8
hypothetical proteinCYJ99_05055Not AvailableNegative1064616 - 106511318731.4
hypothetical proteinCYJ99_05060Not AvailableNegative1065106 - 106715177707.8
hypothetical proteinCYJ99_05065Not AvailableNegative1067151 - 1071089151349.0
pimeloyl-[acyl-carrier protein] methyl ester esteraseCYJ99_05070Not AvailableNegative1071182 - 107192827069.6
comf family proteinCYJ99_05075Not AvailablePositive1071927 - 107264327054.0
trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trmlCYJ99_05080Not AvailablePositive1072708 - 107317216972.6
septal ring lytic transglycosylase rlpa family lipoproteinCYJ99_05085Not AvailablePositive1073221 - 107394026136.1
holliday junction branch migration protein ruvaCYJ99_05090Not AvailablePositive1074039 - 107462320830.2

Displaying genes 991 – 1000 of 2184 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.