Neisseria sicca strain UMB0321

Coccus

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Neisseria

Description

Neisseria sicca strain UMB0321 is a Gram-negative coccus, characterized by its spherical shape. This bacterium possesses flagella, which are appendages that can facilitate movement. Notably, N. sicca strain UMB0321 has a single replicon, indicating that it has one circular chromosome, a typical trait among many bacteria. The primary host for N. sicca is Homo sapiens, suggesting its ecological niche is within the human microbiome. This species is part of the normal flora found in the human respiratory tract and is often associated with mucosal surfaces. The accession number for the genomic sequence of N. sicca strain UMB0321 is PKJO00000000.1, which provides a reference for further genomic studies and comparisons with other strains. Understanding the traits of N. sicca strain UMB0321 may offer insights into its role in the human microbiome, particularly its potential interactions with the host immune system and other microbial species. Given its classification as a commensal organism, N. sicca may play a role in maintaining the balance of microbial communities within the human body. This balance is crucial for health, as disturbances can lead to opportunistic infections or other dysbiotic conditions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusNeisseria
SpeciesNeisseria sicca
Strainstrain UMB0321

Profile

Physiology
Gram staining propertiesNegative
ShapeCoccus
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Neisseria sicca strain UMB0321
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatearly plaque; human pharynx
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Neisseria sicca strain UMB0321 .16933_8_31.47, whole genome

Gene Summary

Adenine Count

602329 bp

Thymine Count

602173 bp

Guanine Count

635396 bp

Cytosine Count

626131 bp

Genome Length

2466093 bp

Protein-coding Genes

2226 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp protease atp-binding subunit clpxCYK00_11040Not AvailablePositive2205627 - 220689546290.4
hypothetical proteinCYK00_11045Not AvailableNegative2206877 - 22070597225.91
bifunctional aconitate hydratase 2/2-methylisocitrate dehydrataseCYK00_11050Not AvailablePositive2207136 - 220972192930.9
chorismate mutaseCYK00_11055Not AvailableNegative2209865 - 221074032741.7
asma family proteinCYK00_11060Not AvailablePositive2210865 - 221303980870.7
aldehyde dehydrogenaseCYK00_11065Not AvailableNegative2213105 - 221413637410.8
protein disulfide oxidoreductaseCYK00_11070Not AvailablePositive2214333 - 221485119315.5
homoprotocatechuate degradation operon regulator hparCYK00_11075Not AvailablePositive2215193 - 221563016534.2
4-hydroxyphenylacetate 3-monooxygenase, reductase componentCYK00_11080Not AvailablePositive2215644 - 221614418470.0
mannose-1-phosphate guanylyltransferaseCYK00_11085Not AvailablePositive2216271 - 221696624907.8

Displaying genes 2081 – 2090 of 2335 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.