Hydrogenovibrio sp. SC-1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Hydrogenovibrio

Description

Hydrogenovibrio sp. SC-1 is a Gram-negative, rod-shaped bacterium characterized by its unique metabolic capabilities. This organism possesses a single replicon, indicating a streamlined genetic architecture that may contribute to its adaptability in various environments. The accession number for Hydrogenovibrio sp. SC-1 is PKGB00000000.1, which is part of the genomic repository that facilitates further research and understanding of its biological functions. The classification of Hydrogenovibrio sp. SC-1 as Gram-negative suggests that it has a thinner peptidoglycan layer and an outer membrane, which can influence its interactions with the environment and other microorganisms. This structural characteristic often plays a significant role in the bacterium's resistance to certain antibiotics and its ability to thrive in diverse conditions. Hydrogenovibrio species are known to be involved in biogeochemical cycles, particularly in hydrogen metabolism, which can have implications for energy production and carbon cycling in their habitats. The ecology of Hydrogenovibrio sp. SC-1 may reflect its potential role in environments rich in hydrogen, such as hydrothermal vents or anaerobic sediments, where it could contribute to the overall microbial community dynamics. In summary, Hydrogenovibrio sp. SC-1 is a Gram-negative, rod-shaped bacterium with a single replicon. Its metabolic capabilities may play an important role in the carbon and energy cycles of its ecological niche, underscoring the significance of such microorganisms in biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusHydrogenovibrio
SpeciesHydrogenovibrio sp. SC-1
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenovibrio sp. SC-1 Ga0079983_141, whole genome shotgun

Gene Summary

Adenine Count

689410 bp

Thymine Count

711397 bp

Guanine Count

557808 bp

Cytosine Count

493458 bp

Genome Length

2452073 bp

Protein-coding Genes

2231 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gnat family n-acetyltransferaseCYQ88_00345Not AvailableNegative72468 - 7356842421.9
duf3419 domain-containing proteinCYQ88_00350Not AvailableNegative73574 - 7482147962.1
duf481 domain-containing proteinCYQ88_00355Not AvailableNegative74959 - 7569026828.3
mechanosensitive ion channel protein mscsCYQ88_00360Not AvailableNegative75687 - 7655931868.3
6-phosphofructokinaseCYQ88_00365Not AvailableNegative76677 - 7795446327.2
ribonuclease dCYQ88_00370Not AvailableNegative78008 - 7915343326.1
udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligaseCYQ88_00375Not AvailablePositive79323 - 8072050703.3
ggdef domain-containing proteinCYQ88_00380Not AvailablePositive80717 - 8173939871.0
atpaseCYQ88_00385Not AvailableNegative81870 - 8241521186.9
glutamate-1-semialdehyde-2,1-aminomutaseCYQ88_00390Not AvailableNegative82427 - 8370745261.3

Displaying genes 71 – 80 of 2271 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.