Hydrogenovibrio sp. SC-1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Hydrogenovibrio

Description

Hydrogenovibrio sp. SC-1 is a Gram-negative, rod-shaped bacterium characterized by its unique metabolic capabilities. This organism possesses a single replicon, indicating a streamlined genetic architecture that may contribute to its adaptability in various environments. The accession number for Hydrogenovibrio sp. SC-1 is PKGB00000000.1, which is part of the genomic repository that facilitates further research and understanding of its biological functions. The classification of Hydrogenovibrio sp. SC-1 as Gram-negative suggests that it has a thinner peptidoglycan layer and an outer membrane, which can influence its interactions with the environment and other microorganisms. This structural characteristic often plays a significant role in the bacterium's resistance to certain antibiotics and its ability to thrive in diverse conditions. Hydrogenovibrio species are known to be involved in biogeochemical cycles, particularly in hydrogen metabolism, which can have implications for energy production and carbon cycling in their habitats. The ecology of Hydrogenovibrio sp. SC-1 may reflect its potential role in environments rich in hydrogen, such as hydrothermal vents or anaerobic sediments, where it could contribute to the overall microbial community dynamics. In summary, Hydrogenovibrio sp. SC-1 is a Gram-negative, rod-shaped bacterium with a single replicon. Its metabolic capabilities may play an important role in the carbon and energy cycles of its ecological niche, underscoring the significance of such microorganisms in biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusHydrogenovibrio
SpeciesHydrogenovibrio sp. SC-1
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenovibrio sp. SC-1 Ga0079983_141, whole genome shotgun

Gene Summary

Adenine Count

689410 bp

Thymine Count

711397 bp

Guanine Count

557808 bp

Cytosine Count

493458 bp

Genome Length

2452073 bp

Protein-coding Genes

2231 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyl-[acp]--phospholipid o-acyltransferaseCYQ88_01740Not AvailableNegative382841 - 38499179183.5
mfs transporterCYQ88_01745Not AvailableNegative384975 - 38629148781.0
aromatic hydrocarbon degradation proteinCYQ88_01750Not AvailableNegative386309 - 38758045684.6
methyl-accepting chemotaxis proteinCYQ88_01755Not AvailableNegative387832 - 39005479899.0
hypothetical proteinCYQ88_01760Not AvailablePositive390234 - 39134941289.3
oligopeptidase aCYQ88_01765Not AvailableNegative391445 - 39348776916.9
sensor domain-containing diguanylate cyclaseCYQ88_01770Not AvailableNegative393579 - 39542068775.5
dna-3-methyladenine glycosylase iCYQ88_01775Not AvailablePositive395549 - 39613322573.8
secondary thiamine-phosphate synthaseCYQ88_01780Not AvailablePositive396141 - 39656015782.5
hypothetical proteinCYQ88_01785Not AvailablePositive396563 - 3967998955.49

Displaying genes 351 – 360 of 2271 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.