Hydrogenovibrio sp. SC-1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Hydrogenovibrio

Description

Hydrogenovibrio sp. SC-1 is a Gram-negative, rod-shaped bacterium characterized by its unique metabolic capabilities. This organism possesses a single replicon, indicating a streamlined genetic architecture that may contribute to its adaptability in various environments. The accession number for Hydrogenovibrio sp. SC-1 is PKGB00000000.1, which is part of the genomic repository that facilitates further research and understanding of its biological functions. The classification of Hydrogenovibrio sp. SC-1 as Gram-negative suggests that it has a thinner peptidoglycan layer and an outer membrane, which can influence its interactions with the environment and other microorganisms. This structural characteristic often plays a significant role in the bacterium's resistance to certain antibiotics and its ability to thrive in diverse conditions. Hydrogenovibrio species are known to be involved in biogeochemical cycles, particularly in hydrogen metabolism, which can have implications for energy production and carbon cycling in their habitats. The ecology of Hydrogenovibrio sp. SC-1 may reflect its potential role in environments rich in hydrogen, such as hydrothermal vents or anaerobic sediments, where it could contribute to the overall microbial community dynamics. In summary, Hydrogenovibrio sp. SC-1 is a Gram-negative, rod-shaped bacterium with a single replicon. Its metabolic capabilities may play an important role in the carbon and energy cycles of its ecological niche, underscoring the significance of such microorganisms in biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusHydrogenovibrio
SpeciesHydrogenovibrio sp. SC-1
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenovibrio sp. SC-1 Ga0079983_141, whole genome shotgun

Gene Summary

Adenine Count

689410 bp

Thymine Count

711397 bp

Guanine Count

557808 bp

Cytosine Count

493458 bp

Genome Length

2452073 bp

Protein-coding Genes

2231 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l35CYQ88_00100Not AvailablePositive19166 - 193637684.66
50s ribosomal protein l20CYQ88_00105Not AvailablePositive19376 - 1973213306.5
phenylalanine--trna ligase subunit alphaCYQ88_00110Not AvailablePositive19971 - 2096937624.2
phenylalanine--trna ligase subunit betaCYQ88_00115Not AvailablePositive20994 - 2337586838.0
integration host factor subunit alphaCYQ88_00120Not AvailablePositive23420 - 2371310953.0
merr family transcriptional regulatorCYQ88_00125Not AvailablePositive23700 - 2408015072.2
hypothetical proteinCYQ88_00130Not AvailableNegative24077 - 2461621290.0
symmetrical bis(5'-nucleosyl)-tetraphosphataseCYQ88_00135Not AvailableNegative24688 - 2554232821.9
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferaseCYQ88_00140Not AvailableNegative25544 - 2633829921.1
4-hydroxythreonine-4-phosphate dehydrogenase pdxaCYQ88_00145Not AvailableNegative26325 - 2734136760.6

Displaying genes 21 – 30 of 2271 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.