Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Hydrogenovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Hydrogenovibrio |
| Species | Hydrogenovibrio sp. SC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689410 bp
Thymine Count
711397 bp
Guanine Count
557808 bp
Cytosine Count
493458 bp
Genome Length
2452073 bp
Protein-coding Genes
2231 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine--trna ligase | CYQ88_01240 | Not Available | Negative | 270649 - 272427 | 65781.4 |
| type i dna topoisomerase | CYQ88_01245 | Not Available | Negative | 272469 - 274958 | 92317.8 |
| dna-protecting protein dpra | CYQ88_01250 | Not Available | Negative | 275145 - 276272 | 40695.9 |
| peptide deformylase | CYQ88_01255 | Not Available | Positive | 276406 - 276912 | 18721.6 |
| methionyl-trna formyltransferase | CYQ88_01260 | Not Available | Positive | 276902 - 277879 | 35138.0 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | CYQ88_01265 | Not Available | Positive | 277866 - 279197 | 49777.8 |
| duf4390 domain-containing protein | CYQ88_01270 | Not Available | Positive | 279201 - 279785 | 22557.3 |
| histidine kinase | CYQ88_01275 | Not Available | Positive | 279789 - 281963 | 81893.6 |
| sigma-54-dependent fis family transcriptional regulator | CYQ88_01280 | Not Available | Positive | 281994 - 283349 | 51019.6 |
| trk system potassium transporter trka | CYQ88_01285 | Not Available | Positive | 283414 - 284811 | 51767.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
