Cupriavidus pauculus strain UM1

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Cupriavidus

Description

Cupriavidus pauculus strain UM1 is a Gram-negative bacterium characterized by the presence of flagella, which likely contributes to its motility. This strain possesses a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation to its environment. The strain is cataloged under the accession number PJRP00000000.1, which provides a reference for its genomic data. As a member of the Cupriavidus genus, C. pauculus is known for its versatility and potential in bioremediation, particularly in environments contaminated with heavy metals. The flagella may enhance its ability to navigate through various substrates, allowing it to exploit diverse ecological niches. The single replicon could indicate a simplified genetic architecture that might be advantageous for survival in fluctuating conditions. In summary, Cupriavidus pauculus strain UM1 exhibits traits that reflect its adaptability and ecological potential. The combination of being Gram-negative, possessing flagella, and having a single replicon suggests that it is well-equipped for motility and efficient replication, which could play a significant role in its ecological interactions and bioremediation capabilities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusCupriavidus
SpeciesCupriavidus pauculus
Strainstrain UM1

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cupriavidus pauculus strain UM1 contig_38, whole genome shotgun

Gene Summary

Adenine Count

1305482 bp

Thymine Count

1301326 bp

Guanine Count

2408988 bp

Cytosine Count

2385884 bp

Genome Length

7402815 bp

Protein-coding Genes

6453 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tripartite tricarboxylate transporter substrate binding proteinCYJ10_23815Not AvailableNegative5246950 - 524804139214.5
protein kinaseCYJ10_23820Not AvailablePositive5248226 - 5253436188383.0
mfs transporterCYJ10_23825Not AvailableNegative5253393 - 525482650729.4
1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenaseCYJ10_23830Not AvailableNegative5254863 - 525563927040.3
nadh oxidaseCYJ10_23835Not AvailableNegative5255636 - 525665836741.8
benzoate 1,2-dioxygenase small subunitCYJ10_23840Not AvailableNegative5256697 - 525718519530.8
benzoate 1,2-dioxygenase large subunitCYJ10_23845Not AvailableNegative5257182 - 525854051439.7
catechol 1,2-dioxygenaseCYJ10_23850Not AvailableNegative5258647 - 525958233663.8
lysr family transcriptional regulatorCYJ10_23855Not AvailablePositive5259757 - 526068035300.0
short-chain dehydrogenaseCYJ10_23860Not AvailableNegative5260766 - 526148525252.2

Displaying genes 4681 – 4690 of 6543 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Ulcerative colitisCausesPMC11205806
PneumoniaCausesPMC11205806
Histiocytic necrotizing lymphadenitisCausesPMC11205806

Displaying health effects 1 – 3 of 3 in total