Cupriavidus pauculus strain UM1

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Cupriavidus

Description

Cupriavidus pauculus strain UM1 is a Gram-negative bacterium characterized by the presence of flagella, which likely contributes to its motility. This strain possesses a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation to its environment. The strain is cataloged under the accession number PJRP00000000.1, which provides a reference for its genomic data. As a member of the Cupriavidus genus, C. pauculus is known for its versatility and potential in bioremediation, particularly in environments contaminated with heavy metals. The flagella may enhance its ability to navigate through various substrates, allowing it to exploit diverse ecological niches. The single replicon could indicate a simplified genetic architecture that might be advantageous for survival in fluctuating conditions. In summary, Cupriavidus pauculus strain UM1 exhibits traits that reflect its adaptability and ecological potential. The combination of being Gram-negative, possessing flagella, and having a single replicon suggests that it is well-equipped for motility and efficient replication, which could play a significant role in its ecological interactions and bioremediation capabilities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusCupriavidus
SpeciesCupriavidus pauculus
Strainstrain UM1

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cupriavidus pauculus strain UM1 contig_38, whole genome shotgun

Gene Summary

Adenine Count

1305482 bp

Thymine Count

1301326 bp

Guanine Count

2408988 bp

Cytosine Count

2385884 bp

Genome Length

7402815 bp

Protein-coding Genes

6453 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
kr domain-containing proteinCYJ10_10840Not AvailableNegative2344810 - 234554125099.3
3-oxoadipyl-coa thiolaseCYJ10_10845Not AvailableNegative2345818 - 234702041791.4
coa transferase subunit bCYJ10_10850Not AvailableNegative2347059 - 234770622555.2
3-oxoadipate coa-transferaseCYJ10_10855Not AvailableNegative2347726 - 234840924070.1
dna repair exonucleaseCYJ10_10860Not AvailableNegative2348762 - 2351833109545.0
exonuclease sbccd subunit dCYJ10_10865Not AvailableNegative2351830 - 235297540853.7
sigma-54-dependent fis family transcriptional regulatorCYJ10_10870Not AvailableNegative2353062 - 235442650270.2
hypothetical proteinCYJ10_10875Not AvailableNegative2354440 - 235611055626.8
duf3613 domain-containing proteinCYJ10_10880Not AvailableNegative2356168 - 235650311590.8
pilus assembly protein taddCYJ10_10885Not AvailableNegative2356500 - 235730628718.1

Displaying genes 2161 – 2170 of 6543 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Ulcerative colitisCausesPMC11205806
PneumoniaCausesPMC11205806
Histiocytic necrotizing lymphadenitisCausesPMC11205806

Displaying health effects 1 – 3 of 3 in total