Pseudomonas sp. YY-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. YY-1 is characterized by having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The genome of this strain is accessible under the accession number PJLX00000000.1, which allows for further study and analysis of its genetic makeup. Pseudomonas species are well known for their versatility in various environments, often exhibiting significant metabolic diversity. This adaptability enables them to thrive in diverse habitats, including soil, water, and plant surfaces. The ecological role of Pseudomonas sp. YY-1 could be significant, particularly in bioremediation processes, where such bacteria are employed to degrade environmental pollutants. Understanding the genomic characteristics of Pseudomonas sp. YY-1, as highlighted by its single replicon, may provide insights into its ecological interactions and potential applications in biotechnology. The streamlined genomic architecture could contribute to its resilience and adaptability in fluctuating environments, underscoring the importance of studying this strain within the broader context of microbial ecology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. YY-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. YY-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. YY-1 scaffold47, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hybrid sensor histidine kinase/response regulatorCXP40_03355Not AvailableNegative714572 - 717358102296.0
phosphoribosylamine--glycine ligaseCXP40_03360Not AvailableNegative717469 - 71875845611.6
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolaseCXP40_03365Not AvailableNegative718874 - 72048157054.3
dna-binding transcriptional regulator fisCXP40_03370Not AvailableNegative720556 - 72087611675.0
trna dihydrouridine synthase dusbCXP40_03375Not AvailableNegative720873 - 72187136118.6
duf3426 domain-containing proteinCXP40_03380Not AvailableNegative722101 - 72337847514.0
50s ribosomal protein l11 methyltransferaseCXP40_03385Not AvailableNegative723432 - 72431031398.3
acetyl-coa carboxylase biotin carboxylase subunitCXP40_03390Not AvailableNegative724622 - 72597749105.2
acetyl-coa carboxylase biotin carboxyl carrier proteinCXP40_03395Not AvailableNegative725995 - 72645616241.6
type ii 3-dehydroquinate dehydrataseCXP40_03400Not AvailableNegative726507 - 72695316205.4

Displaying genes 731 – 740 of 4640 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.