Pseudomonas sp. YY-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. YY-1 is characterized by having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The genome of this strain is accessible under the accession number PJLX00000000.1, which allows for further study and analysis of its genetic makeup. Pseudomonas species are well known for their versatility in various environments, often exhibiting significant metabolic diversity. This adaptability enables them to thrive in diverse habitats, including soil, water, and plant surfaces. The ecological role of Pseudomonas sp. YY-1 could be significant, particularly in bioremediation processes, where such bacteria are employed to degrade environmental pollutants. Understanding the genomic characteristics of Pseudomonas sp. YY-1, as highlighted by its single replicon, may provide insights into its ecological interactions and potential applications in biotechnology. The streamlined genomic architecture could contribute to its resilience and adaptability in fluctuating environments, underscoring the importance of studying this strain within the broader context of microbial ecology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. YY-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. YY-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. YY-1 scaffold47, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxy-3-polyprenylbenzoate decarboxylaseCXP40_19485Not AvailablePositive4101164 - 410263054852.2
cdp-6-deoxy-delta-3,4-glucoseen reductaseCXP40_19490Not AvailablePositive4102630 - 410359835443.4
duf3309 domain-containing proteinCXP40_19495Not AvailablePositive4103908 - 41040665440.21
nadph:quinone oxidoreductaseCXP40_19500Not AvailableNegative4104267 - 410524734202.5
flagellar basal body-associated protein flilCXP40_19505Not AvailablePositive4105403 - 410580714923.2
hypothetical proteinCXP40_19510Not AvailableNegative4105872 - 410699641038.9
multidrug abc transporter atp-binding proteinCXP40_19515Not AvailableNegative4106996 - 410970199097.1
glycoside hydrolase family 43CXP40_19520Not AvailableNegative4109698 - 411078939168.9
sensor domain-containing diguanylate cyclaseCXP40_19525Not AvailableNegative4110834 - 411269070299.7
eve domain-containing proteinCXP40_19530Not AvailableNegative4112740 - 411318916941.2

Displaying genes 3851 – 3860 of 4640 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.