Pseudomonas sp. YY-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. YY-1 is characterized by having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The genome of this strain is accessible under the accession number PJLX00000000.1, which allows for further study and analysis of its genetic makeup. Pseudomonas species are well known for their versatility in various environments, often exhibiting significant metabolic diversity. This adaptability enables them to thrive in diverse habitats, including soil, water, and plant surfaces. The ecological role of Pseudomonas sp. YY-1 could be significant, particularly in bioremediation processes, where such bacteria are employed to degrade environmental pollutants. Understanding the genomic characteristics of Pseudomonas sp. YY-1, as highlighted by its single replicon, may provide insights into its ecological interactions and potential applications in biotechnology. The streamlined genomic architecture could contribute to its resilience and adaptability in fluctuating environments, underscoring the importance of studying this strain within the broader context of microbial ecology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. YY-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. YY-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. YY-1 scaffold47, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-deoxy-8-phosphooctulonate synthaseCXP40_18665Not AvailablePositive3942159 - 394300430830.5
phosphopyruvate hydrataseCXP40_18670Not AvailablePositive3943152 - 394444145117.7
cell division protein ftsbCXP40_18675Not AvailablePositive3944730 - 394500810707.1
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseCXP40_18680Not AvailablePositive3945005 - 394570325532.6
ribosomal subunit interface proteinCXP40_18685Not AvailableNegative3945717 - 394604012238.5
lysr family transcriptional regulatorCXP40_18690Not AvailableNegative3946184 - 394708033852.7
s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenaseCXP40_18695Not AvailablePositive3947298 - 394841039128.2
s-formylglutathione hydrolaseCXP40_18700Not AvailablePositive3948510 - 394935831076.8
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseCXP40_18705Not AvailablePositive3949458 - 394993116709.3
trna pseudouridine(13) synthase trudCXP40_18710Not AvailablePositive3949928 - 395098638743.3

Displaying genes 3691 – 3700 of 4640 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.