Pseudomonas sp. YY-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. YY-1 is characterized by having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The genome of this strain is accessible under the accession number PJLX00000000.1, which allows for further study and analysis of its genetic makeup. Pseudomonas species are well known for their versatility in various environments, often exhibiting significant metabolic diversity. This adaptability enables them to thrive in diverse habitats, including soil, water, and plant surfaces. The ecological role of Pseudomonas sp. YY-1 could be significant, particularly in bioremediation processes, where such bacteria are employed to degrade environmental pollutants. Understanding the genomic characteristics of Pseudomonas sp. YY-1, as highlighted by its single replicon, may provide insights into its ecological interactions and potential applications in biotechnology. The streamlined genomic architecture could contribute to its resilience and adaptability in fluctuating environments, underscoring the importance of studying this strain within the broader context of microbial ecology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. YY-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. YY-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. YY-1 scaffold47, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
coa pyrophosphataseCXP40_16660Not AvailablePositive3519675 - 352028022693.0
gamma carbonic anhydrase family proteinCXP40_16665Not AvailablePositive3520302 - 352082918796.6
duf1289 domain-containing proteinCXP40_16670Not AvailablePositive3520816 - 35210227644.2
phosphoribosylglycinamide formyltransferase 2CXP40_16675Not AvailablePositive3521044 - 352222542270.7
lysophospholipaseCXP40_16680Not AvailablePositive3522222 - 352295626476.2
hlyc/corc family transporterCXP40_16685Not AvailableNegative3522928 - 352421447091.3
inner membrane protein ypjdCXP40_16690Not AvailableNegative3524225 - 352502529528.2
signal recognition particle proteinCXP40_16695Not AvailablePositive3525183 - 352656249224.6
30s ribosomal protein s16CXP40_16700Not AvailablePositive3526704 - 35269559159.98
ribosome maturation factor rimmCXP40_16705Not AvailablePositive3526964 - 352750019818.8

Displaying genes 3301 – 3310 of 4640 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.