Pseudomonas sp. YY-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. YY-1 is characterized by having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The genome of this strain is accessible under the accession number PJLX00000000.1, which allows for further study and analysis of its genetic makeup. Pseudomonas species are well known for their versatility in various environments, often exhibiting significant metabolic diversity. This adaptability enables them to thrive in diverse habitats, including soil, water, and plant surfaces. The ecological role of Pseudomonas sp. YY-1 could be significant, particularly in bioremediation processes, where such bacteria are employed to degrade environmental pollutants. Understanding the genomic characteristics of Pseudomonas sp. YY-1, as highlighted by its single replicon, may provide insights into its ecological interactions and potential applications in biotechnology. The streamlined genomic architecture could contribute to its resilience and adaptability in fluctuating environments, underscoring the importance of studying this strain within the broader context of microbial ecology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. YY-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. YY-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. YY-1 scaffold47, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ykgj family cysteine cluster proteinCXP40_12500Not AvailablePositive2639094 - 263946513378.8
nitroreductaseCXP40_12505Not AvailablePositive2639778 - 264033820070.4
two-component sensor histidine kinaseCXP40_12510Not AvailableNegative2640351 - 264167949109.2
ltxxq domain proteinCXP40_12515Not AvailableNegative2641743 - 264215616017.4
dna-binding response regulatorCXP40_12520Not AvailableNegative2642434 - 264311124913.2
translation initiation factor 2 (if-2, gtpase)CXP40_12525Not AvailableNegative2643115 - 264348913943.8
hypothetical proteinCXP40_12530Not AvailableNegative2643531 - 264383010683.8
php domain-containing proteinCXP40_12535Not AvailablePositive2643951 - 264481731377.3
threonylcarbamoyl-amp synthaseCXP40_12540Not AvailablePositive2644831 - 264545723090.1
tryptophan--trna ligaseCXP40_12545Not AvailablePositive2645644 - 264685845249.8

Displaying genes 2531 – 2540 of 4640 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.