Pseudomonas sp. YY-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. YY-1 is characterized by having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The genome of this strain is accessible under the accession number PJLX00000000.1, which allows for further study and analysis of its genetic makeup. Pseudomonas species are well known for their versatility in various environments, often exhibiting significant metabolic diversity. This adaptability enables them to thrive in diverse habitats, including soil, water, and plant surfaces. The ecological role of Pseudomonas sp. YY-1 could be significant, particularly in bioremediation processes, where such bacteria are employed to degrade environmental pollutants. Understanding the genomic characteristics of Pseudomonas sp. YY-1, as highlighted by its single replicon, may provide insights into its ecological interactions and potential applications in biotechnology. The streamlined genomic architecture could contribute to its resilience and adaptability in fluctuating environments, underscoring the importance of studying this strain within the broader context of microbial ecology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. YY-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. YY-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. YY-1 scaffold47, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter substrate-binding proteinCXP40_08240Not AvailableNegative1756748 - 175750328446.1
amino acid abc transporter substrate-binding proteinCXP40_08245Not AvailableNegative1757637 - 175839228062.6
amino acid abc transporter substrate-binding proteinCXP40_08250Not AvailableNegative1758477 - 175921127409.8
imidazole glycerol phosphate synthase subunit hisfCXP40_08255Not AvailableNegative1759411 - 176018127261.7
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseCXP40_08260Not AvailableNegative1760254 - 176099125809.1
duf2164 domain-containing proteinCXP40_08265Not AvailableNegative1761029 - 17612839766.7
imidazole glycerol phosphate synthase subunit hishCXP40_08270Not AvailableNegative1761283 - 176192123608.2
imidazoleglycerol-phosphate dehydratase hisbCXP40_08275Not AvailableNegative1761922 - 176251522020.5
mfs transporterCXP40_08280Not AvailableNegative1762662 - 176432058742.7
asma family proteinCXP40_08285Not AvailablePositive1764698 - 176692380694.7

Displaying genes 1691 – 1700 of 4640 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.