Psychrobacter sp. Sarcosine-3u-12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter sp. Sarcosine-3u-12 is a psychrophilic bacterium characterized by the presence of flagella, which contribute to its motility in cold environments. This organism has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication under the conditions in which it thrives. The genetic information of Psychrobacter sp. Sarcosine-3u-12 is cataloged under the accession number PJBY00000000.1, providing a basis for further genomic studies and comparisons with related species. The flagella allow this bacterium to navigate its habitat effectively, which can be critical for accessing nutrients and avoiding unfavorable conditions. This species' adaptation to cold environments suggests ecological roles in nutrient cycling, particularly in polar and deep-sea ecosystems where psychrophilic organisms are essential for breaking down organic matter. By performing such functions, Psychrobacter sp. Sarcosine-3u-12 may contribute to the overall health and stability of its ecological niche, highlighting the importance of studying microbial diversity in extreme habitats. Understanding the characteristics and behaviors of such organisms can provide insights into their roles in biogeochemical processes and their potential applications in biotechnology and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter sp. Sarcosine-3u-12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter sp. Sarcosine-3u-12 contig2, whole genome shotgun

Gene Summary

Adenine Count

1002536 bp

Thymine Count

999424 bp

Guanine Count

770752 bp

Cytosine Count

758198 bp

Genome Length

3530910 bp

Protein-coding Genes

2870 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribonuclease p protein componentCXF65_09630Not AvailableNegative2297880 - 229825114307.7
50s ribosomal protein l34CXF65_09635Not AvailableNegative2298437 - 22985715273.72
chromosomal replication initiator protein dnaaCXF65_09640Not AvailablePositive2299183 - 230062854611.0
dna polymerase iii subunit betaCXF65_09645Not AvailablePositive2300834 - 230200943246.2
dna replication and repair protein recfCXF65_09650Not AvailablePositive2302204 - 230341845854.0
dna topoisomerase (atp-hydrolyzing) subunit bCXF65_09655Not AvailablePositive2303920 - 230656297942.0
hypothetical proteinCXF65_09660Not AvailablePositive2306689 - 230817057177.1
manganese efflux pump mntpCXF65_09665Not AvailablePositive2308233 - 230886221651.1
23s rrna (adenine(1618)-n(6))-methyltransferase rlmfCXF65_09670Not AvailableNegative2309214 - 231025138912.2
mfs transporterCXF65_09675Not AvailableNegative2310317 - 231101525831.2

Displaying genes 1891 – 1900 of 2920 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.