Psychrobacter sp. Sarcosine-3u-12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter sp. Sarcosine-3u-12 is a psychrophilic bacterium characterized by the presence of flagella, which contribute to its motility in cold environments. This organism has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication under the conditions in which it thrives. The genetic information of Psychrobacter sp. Sarcosine-3u-12 is cataloged under the accession number PJBY00000000.1, providing a basis for further genomic studies and comparisons with related species. The flagella allow this bacterium to navigate its habitat effectively, which can be critical for accessing nutrients and avoiding unfavorable conditions. This species' adaptation to cold environments suggests ecological roles in nutrient cycling, particularly in polar and deep-sea ecosystems where psychrophilic organisms are essential for breaking down organic matter. By performing such functions, Psychrobacter sp. Sarcosine-3u-12 may contribute to the overall health and stability of its ecological niche, highlighting the importance of studying microbial diversity in extreme habitats. Understanding the characteristics and behaviors of such organisms can provide insights into their roles in biogeochemical processes and their potential applications in biotechnology and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter sp. Sarcosine-3u-12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter sp. Sarcosine-3u-12 contig2, whole genome shotgun

Gene Summary

Adenine Count

1002536 bp

Thymine Count

999424 bp

Guanine Count

770752 bp

Cytosine Count

758198 bp

Genome Length

3530910 bp

Protein-coding Genes

2870 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hemin uptake protein hempCXF65_08315Not AvailableNegative1974491 - 19746556572.07
nudix hydrolaseCXF65_08320Not AvailablePositive1974950 - 197601739522.3
lipocalinCXF65_08325Not AvailablePositive1976491 - 197775045897.1
glyceraldehyde-3-phosphate dehydrogenaseCXF65_08330Not AvailablePositive1978122 - 197956751568.1
gtpase obgCXF65_08335Not AvailablePositive1979887 - 198110144319.3
glutamate 5-kinaseCXF65_08340Not AvailablePositive1981181 - 198235342666.1
uroporphyrinogen decarboxylaseCXF65_08345Not AvailablePositive1982757 - 198389342362.4
n-acetyl-gamma-glutamyl-phosphate reductaseCXF65_08350Not AvailablePositive1984044 - 198511138791.5
hypothetical proteinCXF65_08355Not AvailablePositive1985227 - 198610232316.0
clp protease clpsCXF65_08360Not AvailablePositive1986477 - 198687214683.3

Displaying genes 1631 – 1640 of 2920 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.