Psychrobacter sp. Sarcosine-3u-12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter sp. Sarcosine-3u-12 is a psychrophilic bacterium characterized by the presence of flagella, which contribute to its motility in cold environments. This organism has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication under the conditions in which it thrives. The genetic information of Psychrobacter sp. Sarcosine-3u-12 is cataloged under the accession number PJBY00000000.1, providing a basis for further genomic studies and comparisons with related species. The flagella allow this bacterium to navigate its habitat effectively, which can be critical for accessing nutrients and avoiding unfavorable conditions. This species' adaptation to cold environments suggests ecological roles in nutrient cycling, particularly in polar and deep-sea ecosystems where psychrophilic organisms are essential for breaking down organic matter. By performing such functions, Psychrobacter sp. Sarcosine-3u-12 may contribute to the overall health and stability of its ecological niche, highlighting the importance of studying microbial diversity in extreme habitats. Understanding the characteristics and behaviors of such organisms can provide insights into their roles in biogeochemical processes and their potential applications in biotechnology and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter sp. Sarcosine-3u-12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter sp. Sarcosine-3u-12 contig2, whole genome shotgun

Gene Summary

Adenine Count

1002536 bp

Thymine Count

999424 bp

Guanine Count

770752 bp

Cytosine Count

758198 bp

Genome Length

3530910 bp

Protein-coding Genes

2870 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-valNot AvailableNot AvailablePositive1898291 - 1898366Not Available
cardiolipin synthaseCXF65_08070Not AvailablePositive1898742 - 190037961301.7
sel1 repeat family proteinCXF65_08075Not AvailablePositive1900551 - 190210457361.9
3-deoxy-d-manno-octulosonic acid transferaseCXF65_08080Not AvailablePositive1902236 - 190393061637.4
16s rrna (uracil(1498)-n(3))-methyltransferaseCXF65_08085Not AvailablePositive1903927 - 190470328457.8
fe(3+) abc transporter substrate-binding proteinCXF65_08090Not AvailablePositive1904961 - 190608540481.6
iron abc transporter permeaseCXF65_08095Not AvailablePositive1906244 - 190793862766.9
iron abc transporter atp-binding proteinCXF65_08100Not AvailablePositive1908065 - 190940549132.2
sam-dependent methyltransferaseCXF65_08105Not AvailableNegative1909449 - 191038435310.9
alpha/beta hydrolaseCXF65_08110Not AvailablePositive1910728 - 191236257852.3

Displaying genes 1581 – 1590 of 2920 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.