Psychrobacter sp. Sarcosine-3u-12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter sp. Sarcosine-3u-12 is a psychrophilic bacterium characterized by the presence of flagella, which contribute to its motility in cold environments. This organism has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication under the conditions in which it thrives. The genetic information of Psychrobacter sp. Sarcosine-3u-12 is cataloged under the accession number PJBY00000000.1, providing a basis for further genomic studies and comparisons with related species. The flagella allow this bacterium to navigate its habitat effectively, which can be critical for accessing nutrients and avoiding unfavorable conditions. This species' adaptation to cold environments suggests ecological roles in nutrient cycling, particularly in polar and deep-sea ecosystems where psychrophilic organisms are essential for breaking down organic matter. By performing such functions, Psychrobacter sp. Sarcosine-3u-12 may contribute to the overall health and stability of its ecological niche, highlighting the importance of studying microbial diversity in extreme habitats. Understanding the characteristics and behaviors of such organisms can provide insights into their roles in biogeochemical processes and their potential applications in biotechnology and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter sp. Sarcosine-3u-12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter sp. Sarcosine-3u-12 contig2, whole genome shotgun

Gene Summary

Adenine Count

1002536 bp

Thymine Count

999424 bp

Guanine Count

770752 bp

Cytosine Count

758198 bp

Genome Length

3530910 bp

Protein-coding Genes

2870 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipid a biosynthesis acyltransferaseCXF65_06335Not AvailableNegative1481232 - 148232941560.6
30s ribosomal protein s9CXF65_06340Not AvailableNegative1482623 - 148300914219.3
50s ribosomal protein l13CXF65_06345Not AvailableNegative1483020 - 148344815712.1
16s rrna (guanine(966)-n(2))-methyltransferase rsmdCXF65_06350Not AvailableNegative1483660 - 148433724790.7
penicillin-binding protein 2CXF65_06355Not AvailableNegative1484366 - 148634573365.2
hypothetical proteinCXF65_06360Not AvailablePositive1487043 - 148837751336.5
heme lyase ccmf/nrfe family subunitCXF65_06365Not AvailablePositive1488635 - 149066574905.9
dsbe family thiol:disulfide interchange proteinCXF65_06370Not AvailablePositive1490667 - 149130523683.6
cytochrome c-type biogenesis protein ccmhCXF65_06375Not AvailablePositive1491341 - 149194922790.3
c-type cytochrome biogenesis protein ccmiCXF65_06380Not AvailablePositive1491946 - 149322646477.8

Displaying genes 1241 – 1250 of 2920 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.