Halomonas sp. Choline-3u-9

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Halomonas

Description

Halomonas sp. Choline-3u-9 is a bacterial species characterized by the presence of flagella, which are important for its motility. The species possesses a single replicon, indicating that it has a streamlined genomic structure that may contribute to its adaptability in various environments. The genomic data for Halomonas sp. Choline-3u-9 is available under the accession PJBI00000000.1, providing a basis for further study and exploration of its genetic characteristics. Halomonas species are known for their halophilic nature, thriving in high-salinity environments. While specific ecological roles of Halomonas sp. Choline-3u-9 are not detailed here, the traits of motility and genomic simplicity suggest that it may play a role in nutrient cycling or as a participant in microbial communities in saline ecosystems. The presence of flagella may enhance its ability to navigate through varied substrates, potentially influencing its ecological interactions and contributions within its habitat. In summary, Halomonas sp. Choline-3u-9's motility, single replicon structure, and available genomic data position it as a significant organism for further research in microbiological and ecological studies, particularly in understanding its role in high-salinity environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusHalomonas
SpeciesHalomonas sp. Choline-3u-9
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Halomonas sp. Choline-3u-9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halomonas sp. Choline-3u-9 contig18, whole genome shotgun

Gene Summary

Adenine Count

1209662 bp

Thymine Count

1187805 bp

Guanine Count

1419374 bp

Cytosine Count

1465114 bp

Genome Length

5281955 bp

Protein-coding Genes

4692 genes

Non-Coding Genes

114 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpbCXF94_05055Not AvailableNegative1063527 - 106485248977.2
acetylornithine deacetylaseCXF94_05060Not AvailablePositive1065069 - 106623542120.1
hypothetical proteinCXF94_05065Not AvailableNegative1066271 - 106778552431.9
tripartite tricarboxylate transporter tctb family proteinCXF94_05070Not AvailableNegative1067798 - 106824716763.6
tripartite tricarboxylate transporter substrate binding proteinCXF94_05075Not AvailableNegative1068329 - 106929435132.6
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylaseCXF94_05080Not AvailableNegative1069398 - 107003622728.5
lysr family transcriptional regulatorCXF94_05085Not AvailablePositive1070126 - 107102833377.4
hypothetical proteinCXF94_05090Not AvailableNegative1071100 - 107141111818.0
hypothetical proteinCXF94_05095Not AvailablePositive1071597 - 107208218038.4
giy-yig nuclease family proteinCXF94_05100Not AvailablePositive1072087 - 107237410914.9

Displaying genes 991 – 1000 of 4806 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.