Pseudomonas sp. Choline-3u-10

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. Choline-3u-10 is characterized by having a single replicon, which indicates a streamlined genomic organization. The genome of this strain is documented under the accession number PJBG00000000.1. This accession provides a reference point for researchers interested in studying the genetic and phenotypic traits of this particular Pseudomonas species. Pseudomonas species are known for their metabolic versatility and ability to thrive in various environments, including soil and aquatic ecosystems. This versatility often allows them to play significant roles in biogeochemical cycles and to contribute to nutrient cycling in their habitats. While specific metabolic pathways or ecological roles for Pseudomonas sp. Choline-3u-10 are not detailed, Pseudomonas species are generally associated with the degradation of organic pollutants, indicating a potential ecological function in bioremediation. Understanding the genetic makeup of Pseudomonas sp. Choline-3u-10 through its single replicon may provide insights into its adaptability and ecological roles. The study of such strains can help elucidate the mechanisms by which Pseudomonas species interact with their environments and contribute to ecosystem health. The documented genomic information could serve as a basis for future research aimed at exploring the specific functions and applications of this strain in microbial ecology and biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. Choline-3u-10
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. Choline-3u-10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. Choline-3u-10 contig7, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sodium-dependent transporterCXF92_03025Not AvailablePositive646292 - 64770149472.7
maleylacetoacetate isomeraseCXF92_03030Not AvailablePositive648032 - 64871224953.8
sodium-dependent transporterCXF92_03035Not AvailablePositive648792 - 65025852377.2
methyl-accepting chemotaxis proteinCXF92_03040Not AvailablePositive650497 - 65238667346.9
type 1 glutamine amidotransferase domain-containing proteinCXF92_03045Not AvailablePositive653470 - 65415324392.9
eal domain-containing proteinCXF92_03050Not AvailableNegative654161 - 65498530321.0
aspartate/tyrosine/aromatic aminotransferaseCXF92_03055Not AvailableNegative655259 - 65645543267.9
4a-hydroxytetrahydrobiopterin dehydrataseCXF92_03060Not AvailableNegative656452 - 65680813309.7
phenylalanine 4-monooxygenaseCXF92_03065Not AvailableNegative657077 - 65786230059.1
sigma-54-dependent phenylalanine hydroxylase transcriptional regulator phhrCXF92_03070Not AvailablePositive658128 - 65968456643.8

Displaying genes 751 – 760 of 4580 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.