Pseudomonas sp. Choline-3u-10

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. Choline-3u-10 is characterized by having a single replicon, which indicates a streamlined genomic organization. The genome of this strain is documented under the accession number PJBG00000000.1. This accession provides a reference point for researchers interested in studying the genetic and phenotypic traits of this particular Pseudomonas species. Pseudomonas species are known for their metabolic versatility and ability to thrive in various environments, including soil and aquatic ecosystems. This versatility often allows them to play significant roles in biogeochemical cycles and to contribute to nutrient cycling in their habitats. While specific metabolic pathways or ecological roles for Pseudomonas sp. Choline-3u-10 are not detailed, Pseudomonas species are generally associated with the degradation of organic pollutants, indicating a potential ecological function in bioremediation. Understanding the genetic makeup of Pseudomonas sp. Choline-3u-10 through its single replicon may provide insights into its adaptability and ecological roles. The study of such strains can help elucidate the mechanisms by which Pseudomonas species interact with their environments and contribute to ecosystem health. The documented genomic information could serve as a basis for future research aimed at exploring the specific functions and applications of this strain in microbial ecology and biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. Choline-3u-10
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. Choline-3u-10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. Choline-3u-10 contig7, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidase m48CXF92_21735Not AvailablePositive4655821 - 465725153038.6
quinolinate synthase nadaCXF92_21740Not AvailableNegative4657312 - 465837038577.4
propionyl-coa--succinate coa transferaseCXF92_21745Not AvailableNegative4658611 - 466010753941.0
Trna-lysNot AvailableNot AvailablePositive4660303 - 4660378Not Available
7-cyano-7-deazaguanine synthase quecCXF92_21755Not AvailableNegative4660431 - 466110523790.3
7-carboxy-7-deazaguanine synthase queeCXF92_21760Not AvailableNegative4661138 - 466178523887.6
tol-pal system protein ybgfCXF92_21765Not AvailableNegative4661902 - 466272929191.9
peptidoglycan-associated lipoproteinCXF92_21770Not AvailableNegative4662736 - 466323918015.1
tol-pal system beta propeller repeat protein tolbCXF92_21775Not AvailableNegative4663289 - 466459048208.7
cell envelope integrity protein tolaCXF92_21780Not AvailableNegative4664587 - 466559136135.8

Displaying genes 4281 – 4290 of 4580 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.