Pseudomonas sp. Choline-3u-10

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. Choline-3u-10 is characterized by having a single replicon, which indicates a streamlined genomic organization. The genome of this strain is documented under the accession number PJBG00000000.1. This accession provides a reference point for researchers interested in studying the genetic and phenotypic traits of this particular Pseudomonas species. Pseudomonas species are known for their metabolic versatility and ability to thrive in various environments, including soil and aquatic ecosystems. This versatility often allows them to play significant roles in biogeochemical cycles and to contribute to nutrient cycling in their habitats. While specific metabolic pathways or ecological roles for Pseudomonas sp. Choline-3u-10 are not detailed, Pseudomonas species are generally associated with the degradation of organic pollutants, indicating a potential ecological function in bioremediation. Understanding the genetic makeup of Pseudomonas sp. Choline-3u-10 through its single replicon may provide insights into its adaptability and ecological roles. The study of such strains can help elucidate the mechanisms by which Pseudomonas species interact with their environments and contribute to ecosystem health. The documented genomic information could serve as a basis for future research aimed at exploring the specific functions and applications of this strain in microbial ecology and biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. Choline-3u-10
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. Choline-3u-10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. Choline-3u-10 contig7, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pts iia-like nitrogen-regulatory protein ptsnCXF92_21175Not AvailableNegative4547480 - 454794416687.2
ribosomal subunit interface proteinCXF92_21180Not AvailableNegative4547951 - 454825911870.3
rna polymerase sigma-54 factorCXF92_21185Not AvailableNegative4548338 - 454985557483.9
lps export abc transporter atp-binding proteinCXF92_21190Not AvailableNegative4550001 - 455072626488.2
lipopolysaccharide transport periplasmic protein lptaCXF92_21195Not AvailableNegative4550726 - 455127420122.9
lps export abc transporter periplasmic protein lptcCXF92_21200Not AvailableNegative4551261 - 455183321563.0
phenylphosphate carboxylase subunit deltaCXF92_21205Not AvailableNegative4551842 - 455236318913.8
kpsf/gutq family sugar-phosphate isomeraseCXF92_21210Not AvailableNegative4552364 - 455333834406.9
abc transporter atp-binding proteinCXF92_21215Not AvailablePositive4553599 - 455441429395.0
abc transporter permeaseCXF92_21220Not AvailablePositive4554407 - 455520428377.1

Displaying genes 4171 – 4180 of 4580 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.