Colwellia sp. 12G3

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Colwelliaceae

Genus

Colwellia

Description

Colwellia sp. 12G3 is a rod-shaped bacterium that possesses flagella, enabling motility. This organism has a single replicon, which is indicative of its genomic structure. The accession number for Colwellia sp. 12G3 is PJAQ00000000.1, which can be used to reference its genomic data in relevant databases. Colwellia species are typically known for their psychrophilic nature, thriving in cold environments, such as deep-sea habitats. While specific ecological roles of Colwellia sp. 12G3 are not detailed in the provided traits, members of this genus are often involved in biogeochemical cycles in marine ecosystems. Their ability to survive and metabolize in low temperatures suggests they could play a significant role in the degradation of organic matter in cold oceanic environments, thereby contributing to nutrient cycling. Overall, the traits of Colwellia sp. 12G3 highlight its potential importance in cold marine ecosystems, although further investigation would be necessary to fully elucidate its ecological roles and interactions within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyColwelliaceae
GenusColwellia
SpeciesColwellia sp. 12G3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Colwellia sp. 12G3 contig1, whole genome shotgun sequence.

Gene Summary

Adenine Count

1567352 bp

Thymine Count

1573119 bp

Guanine Count

949695 bp

Cytosine Count

965420 bp

Genome Length

5055586 bp

Protein-coding Genes

4114 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna polymerase iii subunit deltaCXF71_06150Not AvailablePositive1478663 - 147972740367.8
nicotinate-nucleotide adenylyltransferaseCXF71_06155Not AvailablePositive1479771 - 148044225249.3
ribosome silencing factorCXF71_06160Not AvailablePositive1480536 - 148085611917.2
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhCXF71_06165Not AvailablePositive1481008 - 148147817397.2
penicillin-binding protein 2CXF71_06170Not AvailablePositive1481544 - 148351473561.2
rod shape-determining protein rodaCXF71_06175Not AvailablePositive1483514 - 148462940898.7
septal ring lytic transglycosylase rlpaCXF71_06180Not AvailablePositive1484675 - 148555632493.8
d-alanyl-d-alanine carboxypeptidaseCXF71_06185Not AvailablePositive1485753 - 148694943846.6
hypothetical proteinCXF71_06190Not AvailablePositive1487102 - 14873659769.87
octanoyltransferaseCXF71_06195Not AvailablePositive1487482 - 148815624589.4

Displaying genes 1211 – 1220 of 4199 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.