Chryseobacterium sp. PMSZPI

rodMotile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium sp. PMSZPI is a rod-shaped bacterium characterized by its single replicon structure, indicating a simplified genomic organization. This trait is significant as it can influence the bacterium's adaptability and replication efficiency. The organism is cataloged under the accession number PIZV00000000.1, which provides a reference point for genomic studies and further research. Members of the Chryseobacterium genus are known for their diverse metabolic capabilities and ecological roles, often found in various environments, including soil and aquatic systems. Their rod shape is typical of many bacteria, potentially facilitating motility and nutrient acquisition in competitive environments. Ecologically, Chryseobacterium species are often involved in the degradation of organic matter, contributing to nutrient cycling in their habitats. This role is critical for maintaining ecosystem health as it supports the breakdown of complex organic compounds, making nutrients available for other organisms in the ecosystem. In conclusion, Chryseobacterium sp. PMSZPI, with its rod shape and single replicon, represents a member of a genus that plays an essential role in ecological processes. Its characteristics suggest potential avenues for further research into its metabolic pathways and environmental interactions, which could have implications for bioremediation and ecosystem management.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium sp. PMSZPI
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitaturanium-enriched environments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium sp. PMSZPI scaffolds79, whole genome shotgun

Gene Summary

Adenine Count

1242680 bp

Thymine Count

1251975 bp

Guanine Count

663848 bp

Cytosine Count

666365 bp

Genome Length

3824868 bp

Protein-coding Genes

3251 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
coproporphyrinogen iii oxidaseCW752_16370Not AvailablePositive3744076 - 374520043550.5
glutamate racemaseCW752_16375Not AvailablePositive3745257 - 374608731174.9
nad(p)h-dependent oxidoreductaseCW752_16380Not AvailableNegative3746414 - 374701322802.4
marr family transcriptional regulatorCW752_16385Not AvailablePositive3747098 - 374744513132.2
16s rrna (guanine(966)-n(2))-methyltransferase rsmdCW752_16390Not AvailableNegative3747442 - 374801421907.2
duf3822 domain-containing proteinCW752_16395Not AvailableNegative3748119 - 374883528070.6
dna mismatch repair proteinCW752_16400Not AvailableNegative3748854 - 374934819037.0
yfce family phosphodiesteraseCW752_16405Not AvailableNegative3749392 - 374988918758.7
hypothetical proteinCW752_16410Not AvailableNegative3749889 - 375033817681.4
hypothetical proteinCW752_16415Not AvailableNegative3750398 - 375086217789.7

Displaying genes 3251 – 3260 of 3318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.