Idiomarina seosinensis strain CL-SP19

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Idiomarina

Description

Idiomarina seosinensis strain CL-SP19 is a marine bacterium notable for its possession of flagella, which suggests motility capabilities that may enhance its ecological adaptability in marine environments. This trait is essential for navigating through various aquatic habitats, potentially aiding in the search for nutrients or evasion from predators. The strain is characterized by having a single replicon, indicating a streamlined genomic organization that may contribute to its efficiency in cellular processes and replication. This feature is significant for understanding the genetic stability and adaptability of the organism in fluctuating marine conditions. The genome of Idiomarina seosinensis strain CL-SP19 is documented under the accession number PIQF00000000.1, which provides a reference for researchers interested in studying its genetic makeup and functional attributes. Understanding the genomic content can offer insights into the metabolic pathways and ecological roles that this bacterium may fulfill in its habitat. In summary, the motility conferred by flagella and the presence of a single replicon highlight the potential adaptability and efficiency of Idiomarina seosinensis strain CL-SP19 in its marine environment. These traits suggest that the strain may play a role in nutrient cycling within its ecosystem, although further studies would be necessary to elucidate its specific ecological functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusIdiomarina
SpeciesIdiomarina seosinensis
Strainstrain CL-SP19

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Idiomarina seosinensis strain CL-SP19 contig6, whole genome

Gene Summary

Adenine Count

707162 bp

Thymine Count

708623 bp

Guanine Count

641176 bp

Cytosine Count

628378 bp

Genome Length

2685339 bp

Protein-coding Genes

2486 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
octanoyltransferaseCWI81_01600Not AvailableNegative354775 - 35544024665.6
hypothetical proteinCWI81_01605Not AvailableNegative355498 - 3557649953.77
d-alanyl-d-alanine carboxypeptidaseCWI81_01610Not AvailableNegative355776 - 35693342210.8
septal ring lytic transglycosylase rlpaCWI81_01615Not AvailableNegative356992 - 35779229814.3
lytic murein transglycosylase bCWI81_01620Not AvailableNegative357796 - 35880038401.9
rod shape-determining protein rodaCWI81_01625Not AvailableNegative358843 - 35995840504.2
penicillin-binding protein 2CWI81_01630Not AvailableNegative359945 - 36183770536.0
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhCWI81_01635Not AvailableNegative361856 - 36232617550.2
ribosome silencing factorCWI81_01640Not AvailableNegative362327 - 36264711893.2
nicotinate-nucleotide adenylyltransferaseCWI81_01645Not AvailableNegative362743 - 36338123699.4

Displaying genes 321 – 330 of 2542 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.