Idiomarina seosinensis strain CL-SP19

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Idiomarina

Description

Idiomarina seosinensis strain CL-SP19 is a marine bacterium notable for its possession of flagella, which suggests motility capabilities that may enhance its ecological adaptability in marine environments. This trait is essential for navigating through various aquatic habitats, potentially aiding in the search for nutrients or evasion from predators. The strain is characterized by having a single replicon, indicating a streamlined genomic organization that may contribute to its efficiency in cellular processes and replication. This feature is significant for understanding the genetic stability and adaptability of the organism in fluctuating marine conditions. The genome of Idiomarina seosinensis strain CL-SP19 is documented under the accession number PIQF00000000.1, which provides a reference for researchers interested in studying its genetic makeup and functional attributes. Understanding the genomic content can offer insights into the metabolic pathways and ecological roles that this bacterium may fulfill in its habitat. In summary, the motility conferred by flagella and the presence of a single replicon highlight the potential adaptability and efficiency of Idiomarina seosinensis strain CL-SP19 in its marine environment. These traits suggest that the strain may play a role in nutrient cycling within its ecosystem, although further studies would be necessary to elucidate its specific ecological functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusIdiomarina
SpeciesIdiomarina seosinensis
Strainstrain CL-SP19

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Idiomarina seosinensis strain CL-SP19 contig6, whole genome

Gene Summary

Adenine Count

707162 bp

Thymine Count

708623 bp

Guanine Count

641176 bp

Cytosine Count

628378 bp

Genome Length

2685339 bp

Protein-coding Genes

2486 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l10CWI81_07550Not AvailableNegative1578613 - 157913118458.5
50s ribosomal protein l1CWI81_07555Not AvailableNegative1579394 - 158008924578.5
50s ribosomal protein l11CWI81_07560Not AvailableNegative1580093 - 158052114761.8
transcription termination/antitermination protein nusgCWI81_07565Not AvailableNegative1580659 - 158119820327.1
preprotein translocase subunit seceCWI81_07570Not AvailableNegative1581200 - 158158013574.8
Trna-trpNot AvailableNot AvailablePositive1581636 - 1581711Not Available
hypothetical proteinCWI81_07580Not AvailablePositive1581835 - 158216112138.2
elongation factor tuCWI81_07585Not AvailableNegative1582151 - 158333543243.8
Trna-thrNot AvailableNot AvailablePositive1583424 - 1583499Not Available
Trna-glyNot AvailableNot AvailablePositive1583513 - 1583587Not Available

Displaying genes 1501 – 1510 of 2542 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.