Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Idiomarinaceae
Genus
Pseudidiomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Idiomarinaceae |
| Genus | Pseudidiomarina |
| Species | Pseudidiomarina sediminum |
| Strain | strain c121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
656006 bp
Thymine Count
645757 bp
Guanine Count
646891 bp
Cytosine Count
674106 bp
Genome Length
2622760 bp
Protein-coding Genes
2389 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | CWI80_08285 | Not Available | Positive | 1742468 - 1744852 | 86391.0 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | CWI80_08290 | Not Available | Positive | 1744883 - 1746250 | 48056.3 |
| lysr family transcriptional regulator | CWI80_08295 | Not Available | Negative | 1746307 - 1747218 | 33405.9 |
| dioxygenase | CWI80_08300 | Not Available | Positive | 1747326 - 1748165 | 30501.4 |
| cytochrome b | CWI80_08305 | Not Available | Positive | 1748168 - 1748689 | 19761.8 |
| tonb-dependent receptor | CWI80_08310 | Not Available | Negative | 1748734 - 1751358 | 95645.0 |
| xre family transcriptional regulator | CWI80_08315 | Not Available | Positive | 1751568 - 1751918 | 13259.3 |
| type ii toxin-antitoxin system hipa family toxin | CWI80_08320 | Not Available | Positive | 1751928 - 1753232 | 48736.9 |
| histidine kinase | CWI80_08325 | Not Available | Positive | 1753392 - 1755107 | 66187.1 |
| ggdef domain-containing response regulator | CWI80_08330 | Not Available | Positive | 1755135 - 1756844 | 64240.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
