Pseudidiomarina homiensis strain PO-M2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Pseudidiomarina

Description

Pseudidiomarina homiensis strain PO-M2 is characterized by having a single replicon, which is significant in understanding its genomic organization and replication dynamics. The strain is cataloged under the accession number PIPX00000000.1, which facilitates its identification in genomic databases and aids in comparative studies with other microbial species. The presence of a single replicon suggests a streamlined genetic architecture, potentially impacting its adaptability and evolutionary stability. This trait may allow for efficient replication and regulation of genetic material, which is particularly advantageous in various environmental conditions. In terms of biological and ecological insights, the traits of Pseudidiomarina homiensis strain PO-M2 could indicate a specialized niche adaptation. The simplicity of having one replicon may reflect evolutionary pressures that favor rapid growth and reproduction in specific habitats. Understanding these characteristics can provide further insights into the ecological roles of Pseudidiomarina homiensis, particularly in marine environments, where such microorganisms often play crucial roles in nutrient cycling and microbial diversity. Overall, the genomic traits of Pseudidiomarina homiensis strain PO-M2 highlight its potential importance in ecological studies, particularly regarding microbial interactions and adaptations in aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusPseudidiomarina
SpeciesPseudidiomarina homiensis
Strainstrain PO-M2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudidiomarina homiensis strain PO-M2 contig6, whole genome

Gene Summary

Adenine Count

653993 bp

Thymine Count

652902 bp

Guanine Count

644271 bp

Cytosine Count

661360 bp

Genome Length

2612526 bp

Protein-coding Genes

2407 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lps export abc transporter permease lptfCWI70_00285Not AvailablePositive66354 - 6743639628.6
lipopolysaccharide abc transporter permease lptgCWI70_00290Not AvailablePositive67438 - 6850839000.1
hypothetical proteinCWI70_00295Not AvailableNegative68542 - 6906919768.2
Trna-leuNot AvailableNot AvailablePositive69267 - 69353Not Available
ribonuclease rCWI70_00305Not AvailablePositive69500 - 7185489701.2
23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmbCWI70_00310Not AvailablePositive71870 - 7261326405.2
hypothetical proteinCWI70_00315Not AvailablePositive72619 - 7307717276.8
30s ribosomal protein s6CWI70_00320Not AvailablePositive73206 - 7357714318.0
primosomal replication protein nCWI70_00325Not AvailablePositive73603 - 7391111195.7
30s ribosomal protein s18CWI70_00330Not AvailablePositive73922 - 741498859.81

Displaying genes 61 – 70 of 2467 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.