Pseudidiomarina homiensis strain PO-M2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Pseudidiomarina

Description

Pseudidiomarina homiensis strain PO-M2 is characterized by having a single replicon, which is significant in understanding its genomic organization and replication dynamics. The strain is cataloged under the accession number PIPX00000000.1, which facilitates its identification in genomic databases and aids in comparative studies with other microbial species. The presence of a single replicon suggests a streamlined genetic architecture, potentially impacting its adaptability and evolutionary stability. This trait may allow for efficient replication and regulation of genetic material, which is particularly advantageous in various environmental conditions. In terms of biological and ecological insights, the traits of Pseudidiomarina homiensis strain PO-M2 could indicate a specialized niche adaptation. The simplicity of having one replicon may reflect evolutionary pressures that favor rapid growth and reproduction in specific habitats. Understanding these characteristics can provide further insights into the ecological roles of Pseudidiomarina homiensis, particularly in marine environments, where such microorganisms often play crucial roles in nutrient cycling and microbial diversity. Overall, the genomic traits of Pseudidiomarina homiensis strain PO-M2 highlight its potential importance in ecological studies, particularly regarding microbial interactions and adaptations in aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusPseudidiomarina
SpeciesPseudidiomarina homiensis
Strainstrain PO-M2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudidiomarina homiensis strain PO-M2 contig6, whole genome

Gene Summary

Adenine Count

653993 bp

Thymine Count

652902 bp

Guanine Count

644271 bp

Cytosine Count

661360 bp

Genome Length

2612526 bp

Protein-coding Genes

2407 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c1CWI70_06600Not AvailableNegative1379605 - 138035728190.0
cytochrome bCWI70_06605Not AvailableNegative1380357 - 138162248682.7
ubiquinol-cytochrome c reductase iron-sulfur subunitCWI70_06610Not AvailableNegative1381619 - 138220921240.1
30s ribosomal protein s9CWI70_06615Not AvailableNegative1382440 - 138283214764.8
50s ribosomal protein l13CWI70_06620Not AvailableNegative1382850 - 138327816043.6
cell division protein zapeCWI70_06625Not AvailableNegative1383553 - 138465642014.3
duf1043 domain-containing proteinCWI70_06630Not AvailablePositive1384748 - 138518516380.2
serine endoprotease degqCWI70_06635Not AvailablePositive1385280 - 138662947081.1
serine proteaseCWI70_06640Not AvailablePositive1386756 - 138780837281.6
udp-n-acetylglucosamine 1-carboxyvinyltransferaseCWI70_06645Not AvailableNegative1387821 - 138907744311.4

Displaying genes 1321 – 1330 of 2467 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.