Pseudidiomarina homiensis strain PO-M2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Pseudidiomarina

Description

Pseudidiomarina homiensis strain PO-M2 is characterized by having a single replicon, which is significant in understanding its genomic organization and replication dynamics. The strain is cataloged under the accession number PIPX00000000.1, which facilitates its identification in genomic databases and aids in comparative studies with other microbial species. The presence of a single replicon suggests a streamlined genetic architecture, potentially impacting its adaptability and evolutionary stability. This trait may allow for efficient replication and regulation of genetic material, which is particularly advantageous in various environmental conditions. In terms of biological and ecological insights, the traits of Pseudidiomarina homiensis strain PO-M2 could indicate a specialized niche adaptation. The simplicity of having one replicon may reflect evolutionary pressures that favor rapid growth and reproduction in specific habitats. Understanding these characteristics can provide further insights into the ecological roles of Pseudidiomarina homiensis, particularly in marine environments, where such microorganisms often play crucial roles in nutrient cycling and microbial diversity. Overall, the genomic traits of Pseudidiomarina homiensis strain PO-M2 highlight its potential importance in ecological studies, particularly regarding microbial interactions and adaptations in aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusPseudidiomarina
SpeciesPseudidiomarina homiensis
Strainstrain PO-M2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudidiomarina homiensis strain PO-M2 contig6, whole genome

Gene Summary

Adenine Count

653993 bp

Thymine Count

652902 bp

Guanine Count

644271 bp

Cytosine Count

661360 bp

Genome Length

2612526 bp

Protein-coding Genes

2407 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l19CWI70_00585Not AvailablePositive117243 - 11760213409.2
bifunctional chorismate mutase/prephenate dehydrogenaseCWI70_00590Not AvailablePositive117697 - 11885742761.3
two-component system response regulatorCWI70_00595Not AvailableNegative118804 - 11918713768.4
cytochrome bCWI70_00600Not AvailablePositive119299 - 11992223398.8
cytochrome c556CWI70_00605Not AvailableNegative119933 - 12039716723.6
amidohydrolaseCWI70_00610Not AvailablePositive120588 - 123674112719.0
amidohydrolaseCWI70_00615Not AvailablePositive123677 - 12496046515.9
anti-sigma factor antagonistCWI70_00620Not AvailablePositive125114 - 12541911486.9
hypothetical proteinCWI70_00625Not AvailablePositive125430 - 12710662805.8
stress response translation initiation inhibitor ycihCWI70_00630Not AvailableNegative127103 - 12744412033.2

Displaying genes 121 – 130 of 2467 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.