Pseudidiomarina donghaiensis strain 908033

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Pseudidiomarina

Description

Pseudidiomarina donghaiensis strain 908033 is a notable marine bacterium characterized by having a single replicon. This trait indicates a streamlined genomic organization, which may contribute to its adaptability in marine environments. The strain is cataloged under the accession number PIPU00000000.1, providing a reference point for further research and identification within microbial databases. As a member of the Pseudidiomarina genus, this strain is likely to exhibit traits associated with marine bacteria, such as the ability to thrive in saline conditions and potential roles in nutrient cycling within marine ecosystems. While specific metabolic or ecological functions of Pseudidiomarina donghaiensis strain 908033 are not detailed here, the existence of such organisms often suggests their involvement in the degradation of organic matter and interactions with other marine microorganisms. Given its classification and traits, Pseudidiomarina donghaiensis strain 908033 may serve as an important model for studying marine microbial ecology, particularly in understanding how single-replicon bacteria adapt to and influence their environments. This can provide insights into the broader ecological roles of marine bacteria in nutrient dynamics and ecosystem health. Further research into this strain could elucidate its specific functions and contributions to marine biogeochemistry.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusPseudidiomarina
SpeciesPseudidiomarina donghaiensis
Strainstrain 908033

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudidiomarina donghaiensis strain 908033 contig15, whole genome

Gene Summary

Adenine Count

668391 bp

Thymine Count

667805 bp

Guanine Count

634484 bp

Cytosine Count

602672 bp

Genome Length

2573352 bp

Protein-coding Genes

2424 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thymidine phosphorylaseCWE24_12275Not AvailableNegative2518715 - 252004646663.2
deoxyribose-phosphate aldolaseCWE24_12280Not AvailableNegative2520046 - 252081326834.9
cytidine deaminaseCWE24_12285Not AvailableNegative2520815 - 252124015204.8
duf2892 domain-containing proteinCWE24_12290Not AvailablePositive2521414 - 25216298069.06
transcriptional regulatorCWE24_12295Not AvailablePositive2521645 - 252196211972.5
ribosomal-protein-alanine n-acetyltransferaseCWE24_12300Not AvailableNegative2521959 - 252241716998.2
hypothetical proteinCWE24_12305Not AvailableNegative2522435 - 252279113242.8
Trna-trpNot AvailableNot AvailablePositive2522840 - 2522916Not Available
outer membrane protein assembly factorCWE24_12315Not AvailablePositive2523040 - 252485468492.4
hypothetical proteinCWE24_12320Not AvailablePositive2524851 - 2528273124330.0

Displaying genes 2431 – 2440 of 2480 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.