Pseudidiomarina donghaiensis strain 908033

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Pseudidiomarina

Description

Pseudidiomarina donghaiensis strain 908033 is a notable marine bacterium characterized by having a single replicon. This trait indicates a streamlined genomic organization, which may contribute to its adaptability in marine environments. The strain is cataloged under the accession number PIPU00000000.1, providing a reference point for further research and identification within microbial databases. As a member of the Pseudidiomarina genus, this strain is likely to exhibit traits associated with marine bacteria, such as the ability to thrive in saline conditions and potential roles in nutrient cycling within marine ecosystems. While specific metabolic or ecological functions of Pseudidiomarina donghaiensis strain 908033 are not detailed here, the existence of such organisms often suggests their involvement in the degradation of organic matter and interactions with other marine microorganisms. Given its classification and traits, Pseudidiomarina donghaiensis strain 908033 may serve as an important model for studying marine microbial ecology, particularly in understanding how single-replicon bacteria adapt to and influence their environments. This can provide insights into the broader ecological roles of marine bacteria in nutrient dynamics and ecosystem health. Further research into this strain could elucidate its specific functions and contributions to marine biogeochemistry.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusPseudidiomarina
SpeciesPseudidiomarina donghaiensis
Strainstrain 908033

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudidiomarina donghaiensis strain 908033 contig15, whole genome

Gene Summary

Adenine Count

668391 bp

Thymine Count

667805 bp

Guanine Count

634484 bp

Cytosine Count

602672 bp

Genome Length

2573352 bp

Protein-coding Genes

2424 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv pilus secretin pilqCWE24_06175Not AvailableNegative1266374 - 126784653934.4
hypothetical proteinCWE24_06180Not AvailableNegative1268527 - 126906019108.9
hypothetical proteinCWE24_06185Not AvailableNegative1269057 - 126964722645.2
pilus assembly protein pilnCWE24_06190Not AvailableNegative1269644 - 127023421981.3
hypothetical proteinCWE24_06195Not AvailableNegative1270222 - 127128938817.7
penicillin-binding protein 1aCWE24_06200Not AvailablePositive1271521 - 127396890093.8
bifunctional aspartate kinase/homoserine dehydrogenase iiCWE24_06205Not AvailableNegative1273972 - 127642292167.6
met regulon transcriptional regulator metjCWE24_06210Not AvailablePositive1276656 - 127697312261.6
addiction module antidote protein, higa familyCWE24_06215Not AvailableNegative1276970 - 127727511938.4
hypothetical proteinCWE24_06220Not AvailableNegative1277272 - 127756210809.5

Displaying genes 1231 – 1240 of 2480 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.