Pseudidiomarina donghaiensis strain 908033

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Pseudidiomarina

Description

Pseudidiomarina donghaiensis strain 908033 is a notable marine bacterium characterized by having a single replicon. This trait indicates a streamlined genomic organization, which may contribute to its adaptability in marine environments. The strain is cataloged under the accession number PIPU00000000.1, providing a reference point for further research and identification within microbial databases. As a member of the Pseudidiomarina genus, this strain is likely to exhibit traits associated with marine bacteria, such as the ability to thrive in saline conditions and potential roles in nutrient cycling within marine ecosystems. While specific metabolic or ecological functions of Pseudidiomarina donghaiensis strain 908033 are not detailed here, the existence of such organisms often suggests their involvement in the degradation of organic matter and interactions with other marine microorganisms. Given its classification and traits, Pseudidiomarina donghaiensis strain 908033 may serve as an important model for studying marine microbial ecology, particularly in understanding how single-replicon bacteria adapt to and influence their environments. This can provide insights into the broader ecological roles of marine bacteria in nutrient dynamics and ecosystem health. Further research into this strain could elucidate its specific functions and contributions to marine biogeochemistry.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusPseudidiomarina
SpeciesPseudidiomarina donghaiensis
Strainstrain 908033

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudidiomarina donghaiensis strain 908033 contig15, whole genome

Gene Summary

Adenine Count

668391 bp

Thymine Count

667805 bp

Guanine Count

634484 bp

Cytosine Count

602672 bp

Genome Length

2573352 bp

Protein-coding Genes

2424 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adenylosuccinate lyaseCWE24_05120Not AvailableNegative1045702 - 104707550969.1
lysogenization regulator hfldCWE24_05125Not AvailableNegative1047075 - 104773424671.9
trna 2-thiouridine(34) synthase mnmaCWE24_05130Not AvailableNegative1047731 - 104886141928.6
pseudouridine synthaseCWE24_05135Not AvailableNegative1048938 - 104958824586.8
hypothetical proteinCWE24_05140Not AvailablePositive1049678 - 105048429035.0
peptidoglycan hydrolaseCWE24_05145Not AvailablePositive1050497 - 105133031079.2
trna 2-thiocytidine(32) synthetase ttcaCWE24_05150Not AvailableNegative1051305 - 105226436078.2
universal stress protein uspeCWE24_05155Not AvailableNegative1052310 - 105323934458.3
sulfite exporter taue/safe family proteinCWE24_05160Not AvailableNegative1053313 - 105397223901.0
cbb3-type cytochrome oxidase assembly protein ccosCWE24_05165Not AvailableNegative1053962 - 10541507001.42

Displaying genes 1021 – 1030 of 2480 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.