Aliidiomarina shirensis strain AIS

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Aliidiomarina

Description

Aliidiomarina shirensis strain AIS is a Gram-negative, rod-shaped bacterium. This organism is characterized by having a single replicon, which is indicative of its genetic structure. The strain is cataloged under the accession number PIPP00000000.1. In terms of its ecological role, as a member of the genus Aliidiomarina, this bacterium is likely to inhabit marine environments, contributing to the microbial diversity found in such ecosystems. Gram-negative bacteria are known for their complex cell wall structure, which can influence their interactions with the environment, including their resilience to certain antibiotics and their role in nutrient cycling. Moreover, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous in stable or nutrient-rich environments, allowing for efficient replication and survival. Understanding the traits of Aliidiomarina shirensis strain AIS can provide insights into the adaptations of marine bacteria and their ecological functions, particularly in nutrient cycling and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusAliidiomarina
SpeciesAliidiomarina shirensis
Strainstrain AIS

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aliidiomarina shirensis strain AIS contig15, whole genome shotgun

Gene Summary

Adenine Count

733396 bp

Thymine Count

720991 bp

Guanine Count

601498 bp

Cytosine Count

654251 bp

Genome Length

2710136 bp

Protein-coding Genes

2433 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l32CWE13_01785Not AvailableNegative388250 - 3884176209.37
23s rrna accumulation protein ycedCWE13_01790Not AvailableNegative388439 - 38895719269.1
septum formation inhibitor mafCWE13_01795Not AvailablePositive389109 - 38975924083.8
had family hydrolaseCWE13_01800Not AvailableNegative389715 - 39040425550.7
23s rrna pseudouridine(955/2504/2580) synthase rlucCWE13_01805Not AvailableNegative390407 - 39137236307.4
ribonuclease eCWE13_01810Not AvailablePositive391969 - 395010111000.0
competence protein comeCWE13_01815Not AvailableNegative395201 - 39556013059.6
orotidine-5'-phosphate decarboxylaseCWE13_01820Not AvailableNegative395631 - 39633825071.3
lipopolysaccharide assembly protein lapbCWE13_01825Not AvailableNegative396335 - 39749244231.4
hypothetical proteinCWE13_01830Not AvailableNegative397496 - 39778610584.7

Displaying genes 361 – 370 of 2491 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.