Aliidiomarina sanyensis strain GYP-17

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Aliidiomarina

Description

Aliidiomarina sanyensis strain GYP-17 is a Gram-negative, rod-shaped bacterium characterized by its single replicon structure. This strain is cataloged under the accession number PIPM00000000.1, which provides a reference for further study and data retrieval. As a member of the Aliidiomarina genus, strain GYP-17 may be associated with marine environments, although specific ecological roles are not detailed in the provided traits. The Gram-negative nature of this bacterium indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, a characteristic that often influences its interactions with the environment and other organisms. The single replicon found in strain GYP-17 suggests a streamlined genomic organization, which can be advantageous for adaptation and survival in specific ecological niches. This structural trait may also allow for efficient regulation of genetic processes, potentially aiding in the bacterium's response to environmental stresses. In summary, Aliidiomarina sanyensis strain GYP-17 presents important traits such as its Gram-negative, rod shape, and single replicon. These characteristics can provide insights into its ecological interactions and adaptability, although further research would be necessary to fully understand its biological significance within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusAliidiomarina
SpeciesAliidiomarina sanyensis
Strainstrain GYP-17

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aliidiomarina sanyensis strain GYP-17 contig48, whole genome

Gene Summary

Adenine Count

642640 bp

Thymine Count

634806 bp

Guanine Count

659389 bp

Cytosine Count

660502 bp

Genome Length

2597337 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna 4-thiouridine(8) synthase thiiCWE11_10195Not AvailableNegative2226289 - 222774654073.6
exodeoxyribonuclease vii small subunitCWE11_10200Not AvailablePositive2227902 - 222817410152.7
(2e,6e)-farnesyl diphosphate synthaseCWE11_10205Not AvailablePositive2228171 - 222908532582.9
1-deoxy-d-xylulose-5-phosphate synthaseCWE11_10210Not AvailablePositive2229090 - 223095267167.8
phosphatidylglycerophosphatase aCWE11_10215Not AvailableNegative2231017 - 223150817775.5
thiamine-phosphate kinaseCWE11_10220Not AvailableNegative2231532 - 223250634925.6
transcription antitermination factor nusbCWE11_10225Not AvailableNegative2232513 - 223293215513.5
6,7-dimethyl-8-ribityllumazine synthaseCWE11_10230Not AvailableNegative2232944 - 223340815943.3
acyltransferaseCWE11_10235Not AvailableNegative2233602 - 223411418884.3
duf3014 domain-containing proteinCWE11_10240Not AvailableNegative2234189 - 223504332319.2

Displaying genes 2051 – 2060 of 2398 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.