Vibrio sp. 10N.286.51.C3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. 10N.286.51.C3 is characterized by having a single replicon, indicating a streamlined genomic structure that may influence its replication and stability. The organism is cataloged under the accession number PIGC00000000.1, which serves as a reference point for genetic and genomic studies. As a member of the Vibrio genus, which encompasses several species known for their ecological roles in marine environments, Vibrio sp. 10N.286.51.C3 may contribute to various biological processes, including nutrient cycling and interactions with other marine organisms. The single replicon trait could suggest a highly efficient mechanism for gene regulation and expression, potentially allowing this Vibrio strain to adapt quickly to changing environmental conditions. The ecological insights provided by the traits of Vibrio sp. 10N.286.51.C3 highlight the importance of genomic structure in the adaptability and survival of microorganisms in marine ecosystems. Understanding its genomic characteristics could also aid in studying its ecological interactions and potential applications in biotechnology or environmental monitoring.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. 10N.286.51.C3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. 10N.286.51.C3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. 10N.286.51.C3 Contig_49, whole genome shotgun sequence.

Gene Summary

Adenine Count

1436189 bp

Thymine Count

1450606 bp

Guanine Count

1156551 bp

Cytosine Count

1135368 bp

Genome Length

5178714 bp

Protein-coding Genes

4443 genes

Non-Coding Genes

123 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trp operon repressorCWO27_10220Not AvailablePositive2361535 - 236182810951.4
non-canonical purine ntp phosphataseCWO27_10225Not AvailableNegative2361934 - 236245518755.3
diguanylate phosphodiesteraseCWO27_10230Not AvailableNegative2362418 - 236479690552.1
bifunctional chorismate mutase/prephenate dehydrataseCWO27_10235Not AvailableNegative2365130 - 236630543770.4
ribosomal subunit interface proteinCWO27_10240Not AvailableNegative2366550 - 236688512813.4
lytic transglycosylase fCWO27_10245Not AvailableNegative2367314 - 236864250705.3
outer membrane protein assembly factor bamdCWO27_10250Not AvailableNegative2368877 - 236960527726.0
23s rrna pseudouridine(1911/1915/1917) synthase rludCWO27_10255Not AvailablePositive2369743 - 237071736440.1
multi-copper polyphenol oxidoreductaseCWO27_10260Not AvailablePositive2370719 - 237145926422.3
atp-dependent chaperone clpbCWO27_10265Not AvailablePositive2371602 - 237417595941.4

Displaying genes 2021 – 2030 of 4566 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.