Vibrio splendidus strain ZF_41

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio splendidus strain ZF_41 is a marine bacterium characterized as Gram-negative and is known for its pathogenicity in animals, particularly affecting species within the Ostreidae family, including the eastern oyster, Magallana gigas. This strain is notable for possessing a single replicon, which refers to its genetic structure containing a single circular DNA molecule. As a fish pathogen, V. splendidus strain ZF_41 can have significant implications for aquaculture and marine ecosystems. The presence of this bacterium in marine environments raises concerns regarding the health of oyster populations, which are economically important and serve essential roles in their ecosystems, such as water filtration and habitat provision. Understanding the traits of Vibrio splendidus strain ZF_41 is crucial for managing its impact on marine life, especially as it relates to the health of bivalve populations. The strain's pathogenicity highlights the need for monitoring and potential intervention strategies in environments where it poses a risk to aquatic animals. Continued research on its biology and ecology can provide insights into its interactions with host organisms and contribute to better management practices in marine aquaculture. Access to its genomic data, indexed under accession number PIEV00000000.1, may further aid in elucidating its pathogenic mechanisms and environmental adaptations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio splendidus
Strainstrain ZF_41

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio splendidus strain ZF_41
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Bivalvia, Holothuroidea, Ostreidae
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityAnimal

Genome Summary

Vibrio splendidus strain ZF_41 Contig_86, whole genome shotgun

Gene Summary

Adenine Count

1601472 bp

Thymine Count

1600009 bp

Guanine Count

1261579 bp

Cytosine Count

1270731 bp

Genome Length

5733793 bp

Protein-coding Genes

4899 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetratricopeptide repeat proteinCWN84_13540Not AvailablePositive3095105 - 309573423419.0
rhodanese-like domain-containing proteinCWN84_13545Not AvailableNegative3095786 - 309613012543.0
ammonia-forming cytochrome c nitrite reductaseCWN84_13550Not AvailableNegative3096258 - 309764652170.1
cytochrome c nitrite reductase pentaheme subunitCWN84_13555Not AvailablePositive3098170 - 309875421546.4
cytochrome c nitrite reductase fe-s proteinCWN84_13560Not AvailablePositive3098758 - 309944424964.6
cytochrome c nitrite reductase subunit nrfdCWN84_13565Not AvailablePositive3099447 - 310042135857.9
heme lyase nrfefg subunit nrfeCWN84_13570Not AvailablePositive3100550 - 310246670861.3
dsbe family thiol:disulfide interchange proteinCWN84_13575Not AvailablePositive3102447 - 310300120048.2
heme lyase nrfefg subunit nrffCWN84_13580Not AvailablePositive3102998 - 310343816636.6
gtp cyclohydrolase ii ribaCWN84_13585Not AvailablePositive3103954 - 310455022057.3

Displaying genes 2651 – 2660 of 5006 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Fish pathogenCausesPMC12838003
Skin ulceration syndromeCausesPMC9653642
SusCausesPMC9653642

Displaying health effects 1 – 3 of 3 in total