Pseudomonas sp. S10E 269

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. S10E 269 is characterized by having a single replicon, indicating a streamlined genomic organization. This species is cataloged under the accession number PHIJ00000000.1, which provides a reference for researchers seeking genetic and genomic information about this particular strain. Pseudomonas species are known for their versatility and adaptability in various environments. They often play significant roles in soil and water ecosystems, contributing to nutrient cycling and degradation of organic pollutants. This ecological role is particularly important in bioremediation, where Pseudomonas strains are utilized to detoxify contaminated environments. The presence of only one replicon in Pseudomonas sp. S10E 269 may suggest specific adaptations that allow for efficient replication and gene expression, potentially enhancing its survival and functional capabilities in diverse habitats. This trait can be significant in understanding the ecological niches that this strain may occupy and its interactions with other microorganisms. Overall, Pseudomonas sp. S10E 269 exemplifies the adaptability of Pseudomonas species and their potential contributions to environmental health. Further studies on this strain could provide insights into its metabolic pathways and applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. S10E 269
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. S10E 269
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. S10E 269 contig_1, whole genome shotgun sequence.

Gene Summary

Adenine Count

1283911 bp

Thymine Count

1274154 bp

Guanine Count

1982881 bp

Cytosine Count

1979876 bp

Genome Length

6520822 bp

Protein-coding Genes

5752 genes

Non-Coding Genes

146 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix transcriptional regulatorCWC48_24045Not AvailableNegative5157985 - 515883331425.9
aspartate aminotransferase family proteinCWC48_24050Not AvailableNegative5158899 - 516031752319.7
spermidine/putrescine abc transporter substrate-binding protein potfCWC48_24055Not AvailableNegative5160343 - 516144340146.1
duf1543 domain-containing proteinCWC48_24060Not AvailableNegative5161541 - 516203518284.9
aldo/keto reductaseCWC48_24065Not AvailablePositive5162142 - 516296330288.3
type vi secretion system tube protein hcpCWC48_24070Not AvailableNegative5163016 - 516353119010.3
type vi secretion system protein tssaCWC48_24075Not AvailablePositive5163973 - 516552659270.3
type vi secretion system contractile sheath small subunitCWC48_24080Not AvailablePositive5165559 - 516605618159.9
type vi secretion system contractile sheath large subunitCWC48_24085Not AvailablePositive5166085 - 516756055669.2
type vi secretion system baseplate subunit tsseCWC48_24090Not AvailablePositive5167575 - 516797614802.8

Displaying genes 4801 – 4810 of 5898 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.