Caviibacterium pharyngocola strain 7.3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Caviibacterium

Description

Caviibacterium pharyngocola strain 7.3 is characterized by having a single replicon, which indicates a streamlined genome organization. This trait can be significant in understanding the organism's replication and stability under various environmental conditions. The strain is cataloged under the accession number PHGZ00000000.1, which provides a unique identifier for its genomic sequence in biological databases. Caviibacterium pharyngocola is part of a genus known for its specific ecological niche, often associated with the pharyngeal microbiome of certain animal hosts. Although specific ecological interactions or roles of strain 7.3 in its environment are not detailed, the presence of a single replicon suggests that it may exhibit efficient resource utilization, potentially allowing it to thrive in competitive microbial communities. Understanding the genomic characteristics of Caviibacterium pharyngocola strain 7.3, including its replicon structure, can aid in elucidating its evolutionary adaptations and ecological functions. This knowledge could ultimately contribute to insights into the dynamics of microbial communities in which this strain is found, highlighting its potential role in maintaining or disrupting ecological balances.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusCaviibacterium
SpeciesCaviibacterium pharyngocola
Strainstrain 7.3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caviibacterium pharyngocola strain 7.3 contig_43, whole genome

Gene Summary

Adenine Count

705894 bp

Thymine Count

700570 bp

Guanine Count

544245 bp

Cytosine Count

535577 bp

Genome Length

2486286 bp

Protein-coding Genes

2236 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endonucleaseCVP04_02695Not AvailableNegative550200 - 55166657161.7
transketolaseCVP04_02700Not AvailableNegative551789 - 55379573384.8
rna polymerase sigma factor rpohCVP04_02705Not AvailableNegative554063 - 55490832052.1
duf2322 domain-containing proteinCVP04_02710Not AvailableNegative555040 - 55535411830.3
udp-n-acetylenolpyruvoylglucosamine reductaseCVP04_02715Not AvailableNegative555384 - 55640937831.9
nitrate/nitrite two-component system sensor histidine kinase narqCVP04_02720Not AvailableNegative556425 - 55812864922.2
ferredoxin-type protein napfCVP04_02725Not AvailablePositive558338 - 55886219209.9
nitrate reductaseCVP04_02730Not AvailablePositive558892 - 5591559781.58
periplasmic nitrate reductase subunit alphaCVP04_02735Not AvailablePositive559201 - 56168493242.1
ferredoxin-type protein napgCVP04_02740Not AvailablePositive561728 - 56248027256.3

Displaying genes 601 – 610 of 2398 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.