Caviibacterium pharyngocola strain 7.3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Caviibacterium

Description

Caviibacterium pharyngocola strain 7.3 is characterized by having a single replicon, which indicates a streamlined genome organization. This trait can be significant in understanding the organism's replication and stability under various environmental conditions. The strain is cataloged under the accession number PHGZ00000000.1, which provides a unique identifier for its genomic sequence in biological databases. Caviibacterium pharyngocola is part of a genus known for its specific ecological niche, often associated with the pharyngeal microbiome of certain animal hosts. Although specific ecological interactions or roles of strain 7.3 in its environment are not detailed, the presence of a single replicon suggests that it may exhibit efficient resource utilization, potentially allowing it to thrive in competitive microbial communities. Understanding the genomic characteristics of Caviibacterium pharyngocola strain 7.3, including its replicon structure, can aid in elucidating its evolutionary adaptations and ecological functions. This knowledge could ultimately contribute to insights into the dynamics of microbial communities in which this strain is found, highlighting its potential role in maintaining or disrupting ecological balances.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusCaviibacterium
SpeciesCaviibacterium pharyngocola
Strainstrain 7.3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caviibacterium pharyngocola strain 7.3 contig_43, whole genome

Gene Summary

Adenine Count

705894 bp

Thymine Count

700570 bp

Guanine Count

544245 bp

Cytosine Count

535577 bp

Genome Length

2486286 bp

Protein-coding Genes

2236 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i-c crispr-associated protein cas7/csd2CVP04_10490Not AvailablePositive2160267 - 216110930059.2
crispr-associated protein cas4CVP04_10495Not AvailablePositive2161109 - 216178625254.3
hypothetical proteinCVP04_10500Not AvailablePositive2161943 - 216275231160.1
hypothetical proteinCVP04_10505Not AvailablePositive2162736 - 216381540164.4
subtype i-c crispr-associated endonuclease cas1CVP04_10510Not AvailablePositive2163939 - 216495238005.2
crispr-associated endonuclease cas2CVP04_10515Not AvailablePositive2165004 - 216529711326.7
elongation factor tuCVP04_10520Not AvailablePositive2169811 - 21700558837.82
group ii intron reverse transcriptase/maturaseCVP04_10525Not AvailablePositive2171590 - 217331166822.4
preprotein translocase subunit seceCVP04_10530Not AvailablePositive2173580 - 217399315079.1
transcription termination/antitermination protein nusgCVP04_10535Not AvailablePositive2173995 - 217454620979.9

Displaying genes 2131 – 2140 of 2398 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.