Caviibacterium pharyngocola strain 7.3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Caviibacterium

Description

Caviibacterium pharyngocola strain 7.3 is characterized by having a single replicon, which indicates a streamlined genome organization. This trait can be significant in understanding the organism's replication and stability under various environmental conditions. The strain is cataloged under the accession number PHGZ00000000.1, which provides a unique identifier for its genomic sequence in biological databases. Caviibacterium pharyngocola is part of a genus known for its specific ecological niche, often associated with the pharyngeal microbiome of certain animal hosts. Although specific ecological interactions or roles of strain 7.3 in its environment are not detailed, the presence of a single replicon suggests that it may exhibit efficient resource utilization, potentially allowing it to thrive in competitive microbial communities. Understanding the genomic characteristics of Caviibacterium pharyngocola strain 7.3, including its replicon structure, can aid in elucidating its evolutionary adaptations and ecological functions. This knowledge could ultimately contribute to insights into the dynamics of microbial communities in which this strain is found, highlighting its potential role in maintaining or disrupting ecological balances.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusCaviibacterium
SpeciesCaviibacterium pharyngocola
Strainstrain 7.3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caviibacterium pharyngocola strain 7.3 contig_43, whole genome

Gene Summary

Adenine Count

705894 bp

Thymine Count

700570 bp

Guanine Count

544245 bp

Cytosine Count

535577 bp

Genome Length

2486286 bp

Protein-coding Genes

2236 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylglucosamine 1-carboxyvinyltransferaseCVP04_08400Not AvailablePositive1748744 - 175001845454.1
class 1 fructose-bisphosphataseCVP04_08405Not AvailableNegative1750073 - 175107437055.4
udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligaseCVP04_08410Not AvailablePositive1751220 - 175258750136.1
cold-shock proteinCVP04_08415Not AvailablePositive1752861 - 17530707623.99
Trna-metNot AvailableNot AvailablePositive1753220 - 1753296Not Available
murein transglycosylase aCVP04_08425Not AvailablePositive1753496 - 175459339549.3
trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcdaCVP04_08430Not AvailablePositive1754578 - 175536628529.8
zinc abc transporter substrate-binding proteinCVP04_08435Not AvailablePositive1755462 - 175647237528.1
bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlmlCVP04_08440Not AvailablePositive1756610 - 175876381328.9
fumarate reductase subunit frddCVP04_08445Not AvailableNegative1758853 - 175919712360.7

Displaying genes 1721 – 1730 of 2398 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.